KEGG   Salvelinus namaycush (lake trout): 120023681
Entry
120023681         CDS       T07522                                 
Symbol
six1a
Name
(RefSeq) homeobox protein six1a
  KO
K15614  homeobox protein SIX1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120023681 (six1a)
Transcription factors [BR:snh03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    120023681 (six1a)
SSDB
Motif
Pfam: SIX1_SD Homeobox_KN Homeodomain HTH_3 YdaS_toxin HTH_72 Phage_mat-A
Other DBs
NCBI-GeneID: 120023681
NCBI-ProteinID: XP_038823663
UniProt: A0A8U0PEH0
LinkDB
Position
Sna28:23224055..23226105
AA seq 284 aa
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSLLLLQGNMSH
PGVSSYPMTGLGGAQPLHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtcaatactaccttcgtttgggtttacccaggagcaagtcgcctgcgtctgcgaggtc
ctgcaacaaggagggaacctggagaggctcggtcgttttctctggtctctcccagcgtgt
gaccacctccacaagaatgaaagtgtactgaaagcaaaggcggtggtcgccttccacaga
gggaacttcagagagctctataagatcctagagagccaccagttttccccgcacaaccat
cccaagctgcagcagctgtggctgaaagcgcactacgtggaggcggaaaaattgcgcggc
cgaccgcttggagccgtggggaagtatagggtccgcaggaaattccctctgccccgcacg
atctgggacggcgaggagaccagctattgctttaaggagaagtccaggggtgttcttaga
gagtggtacacgcataacccctatccctccccgcgagagaaaagggagctggccgaggcc
acgggactgaccactacgcaggtcagcaattggttcaaaaacagacgccagagagacaga
gccgcagaagctaaagaaagagagaacagcgaaaacaataactctggcaacaacaaacag
aaccagctgtctcccctcgacggcggcaagtcgctcatgtccagctcggaagatgagttc
tctccaccacaaagccctgatcagaactctttgcttttgctccagggaaatatgagtcac
cccggcgtctcctcttaccctatgaccggcctcggtggcgcacagccgctgcatggaatg
cacggacacccgcaccaactccaagactcgttgctgggacctctaacatcgagccttgtg
gatctaggctcctaa

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