Salvelinus namaycush (lake trout): 120023696
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Entry
120023696 CDS
T07522
Name
(RefSeq) all trans-polyprenyl-diphosphate synthase PDSS2-like isoform X1
KO
K12505
decaprenyl-diphosphate synthase subunit 2 [EC:
2.5.1.91
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120023696
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
snh01006
]
120023696
Enzymes [BR:
snh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
120023696
Prenyltransferases [BR:
snh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120023696
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
120023696
NCBI-ProteinID:
XP_038823681
UniProt:
A0A8U0TQ45
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Position
Sna28:21096567..21121828
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AA seq
384 aa
AA seq
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MTVIWFRLKCIGLLNRGQRNISIFSNATPSNLNKVVSDAEKIVGYPTSFMSLRCLLSDEL
SNVAMHVRKLVGTKHPLLSTARGFIYDSRKNLQMRGLVVLLMSKAAGPSQHTASDLLPQD
MVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFGNKMAVLSGDFLL
ANACTGLAQLNNTKVVELISSAIGDLVQGIYHEIPNRLEDNSLTDEINMVTWEEQTFLSH
GALLAKSCQAAMELAKHDKDAQGLAYKYGKHLSLGHKLNSDLQLFVKSSSADPVTFSFNS
APVAFHRQIVGQERWCHQLQQAKTIGRQMDYTKLRSTIKLEKGVTSTIDLCRYHGNKALE
SIQCFPSSEARSALENIARAVTKF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaatttggtttagactcaagtgcatcggtttgttaaaccgtggacagaggaac
ataagtattttctccaacgcaacgccttctaatttgaataaagtggtctcggatgcagag
aaaatcgtgggttatccgacctccttcatgagcctgcgttgcttgctgagtgatgaactt
agtaatgtagcaatgcacgtgaggaaactggttggaacaaaacacccgttactcagcact
gcaaggggcttcatctatgacagcagaaaaaaccttcagatgaggggcctggtggtcctg
ttgatgtccaaggcagctggtcccagccagcacacagcctcagacctcctgccccaggac
atggtcagcggcatctaccccagccagaggaacctggctgaaatcacagagctcatccac
acggccttcctggtgcatcgtgggatcgtcaacctaaaggagtggaccaactctgacggt
cccctgaaggacatgcagtttggaaacaagatggccgttctcagtggggacttcttgctt
gccaatgcttgcactggactggcccagctaaacaatactaaggttgtggagttgatatcg
agtgccattggtgacttggtgcagggaatctaccatgagatccccaaccgtttggaggac
aatagcctgactgatgaaatcaacatggtcacgtgggaggagcagacgttcttgtcccat
ggtgccttgctggcaaaaagctgtcaggcagcgatggagcttgccaaacatgacaaagat
gcccaaggactggcttacaaatatggcaagcatctatcattgggccacaagttgaattct
gacttgcagctatttgtaaagagcagctcagcagacccagtaaccttcagttttaactcg
gcccctgtggctttccaccgtcagattgtggggcaggagagatggtgtcatcagctgcaa
caggcaaaaactattggaagacaaatggactatacaaagctgcggtccacgatcaagttg
gagaaaggtgtcacctcgacaatagatctgtgtcgttaccacggcaacaaagctctggag
tccatccagtgtttcccttcctctgaggcacgctcagccttggagaacatcgctcgcgct
gtcacaaagttctga
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