Salvelinus namaycush (lake trout): 120023734
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Entry
120023734 CDS
T07522
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
snh03083
Polycomb repressive complex
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120023734
03083 Polycomb repressive complex
120023734
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120023734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120023734
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120023734
Histone modification proteins
HAT complexes
HATB complex
120023734
HDAC complexes
Sin3A-HDAC complex
120023734
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120023734
PRC2.2
120023734
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
120023734
Heterochromatin formation proteins
Other heterochromatin formation proteins
120023734
Chromatin remodeling factors
NuRD complex
120023734
NuRF complex
120023734
NuRF complex (fruit fly)
120023734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120023734
NCBI-ProteinID:
XP_038823735
UniProt:
A0A8U0PFE8
LinkDB
All DBs
Position
Sna28:28974761..28978565
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARHMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMEVWQMAENIYNDEDPEGAADT
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaagcagcgtttgatgatgctgtggaggagagggtgataaatgaggag
tacaagatatggaagaagaacacgcccttcctctatgacctggtgatgacccacgccctg
gagtggcccagcctcacagcacagtggctgcctgatgtcaccagacctgaggggaaggat
ttcagtgtacacaggctggttcttggcacacacacatcagatgaacagaatcacctggtc
attgccagcgtgcaactgcccaatgacgacgcgcagtttgatgcttctcactatgatagt
gagaaaggcgagtttggaggctttggctcagtcagtggtaagatagagattgaaatcaag
ataaaccatgagggagaggtgaacagagcccgccacatgccccagaacccctgcatcatc
gccaccaaaaccccaaccagtgatgtgcttgtctttgactacaccaaacatccctccaaa
ccagatccatctggagagtgcaccccagatctgcgtttgaggggacaccagaaggagggt
tacggtctctcctggaaccccaacctgagtggctgtcttctcagcgcttctgatgaccat
acgatctgtatgtgggacatcagtgcagttcctaaggaggggaaggttgtggacgctaag
accatcttcactggacacacagctgttgtggaggacgtttcttggcatctactgcacgag
tccctctttggatctgtagctgacgaccagaaactcatgatttgggacacgcgatcaaac
aatacgtcgaaacctagccatgctgtggacgcccacactgcagaggtcaactgtctgtcc
ttcaacccttacagcgagttcatcctggcctcaggctcagcagacaagacggttgctctt
tgggacctgaggaacctgaaactgaagctgcattcatttgagtctcacaaagatgagatc
tttcaggtccagtggtctcctcataatgaaaccatcttggcctccagtggcacagacagg
cgactcaacgtgtgggacctcagtaaaatcggagaggagcagtcgccagaggatgctgag
gatggtccacctgaactgctgttcattcacggtggtcacacagctaagatctccgacttc
tcgtggaaccccaacgagccctgggtcatctgttcggtgtctgaggacaacatcatggaa
gtttggcagatggctgagaacatctacaatgacgaggacccagagggagcagcagacact
gaggtccaggcatga
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