Salvelinus namaycush (lake trout): 120023779
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Entry
120023779 CDS
T07522
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
snh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120023779 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
120023779 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120023779 (mnat1)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120023779 (mnat1)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120023779 (mnat1)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120023779 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
OrtA
zf-C3HC4
zf-UDP
zf-RING_2
Xol-1_N
TRAF6_Z2
zf-P11
Motif
Other DBs
NCBI-GeneID:
120023779
NCBI-ProteinID:
XP_038823808
UniProt:
A0A8U0PFV1
LinkDB
All DBs
Position
Sna28:complement(23148239..23209984)
Genome browser
AA seq
310 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKRDFDFSNLREYNDYLERVEEIVYNLTNNLEVEGTKQ
IMEAYQRENRDIIQKNKAKLTREQEELEELLLLEQQGNEQRRLETLQEEQRQLQAKRKSK
QALLDELERSHVPATILLAQHKDRAAQLETQIEKQKQVVKTTIFSTGIPMGQTVSLLTVT
RLEEVLYHYQPIHIHTYGPPVPELEQLGRLGYLNHVRTAQPQDMAGGYNSGLACHRAIQD
AFSGLFHPLG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaagggtgtccgagatgcaagacaacaaaatacaggaatccttctctgaaa
ctgatggtgaatgtttgtggccacacgctatgtgagagctgtgtggacatgctgtttgtg
cgcggctcggggaactgtgtgcagtgcgacacgcccctgaggaagagtaacttccgtgtg
cagctctttgaagaccctgccgtcgacaaggaggtggagatccgtaagaaggtgctcaag
atttacaacaagagagactttgatttctccaacttgagagaatacaatgactacttggag
cgagtggaggagattgtctataacctgaccaacaacctggaggtggaggggaccaaacag
atcatggaggcataccagagagagaatagagacatcattcagaagaacaaggccaagctg
actcgagagcaggaggagttggaggagctgctgttgttggagcagcaggggaacgagcag
cgcaggctggagactctgcaggaagaacagagacagttacaggccaagaggaagagcaag
caggctctactggacgaactggagcgctctcatgtccccgccaccatcctgctggcccaa
cacaaggaccgggccgcccagctggagacccagattgagaagcagaaacaggtggtcaaa
accaccatcttctccaccggcatccctatgggtcagactgtgtcgctgctgaccgtgacc
cggttagaagaggttctgtaccactaccagcccatccacatccacacatacggacccccc
gtccctgagctggagcagctggggcgactcgggtatttgaaccacgtgcgtactgcccag
ccccaggacatggctggaggatacaactcaggactggcgtgtcatcgagccatccaggat
gccttcagtgggctcttccatccactgggctga
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integrated database retrieval system
