Salvelinus namaycush (lake trout): 120023815
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Entry
120023815 CDS
T07522
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120023815
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120023815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120023815
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Others
Platelet activating factor
120023815
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Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srv
7tm_4
7TM_GPCR_Srw
7TM_GPCR_Sri
Motif
Other DBs
NCBI-GeneID:
120023815
NCBI-ProteinID:
XP_038823861
UniProt:
A0A8U0TQA4
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Position
Sna28:38707210..38728332
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AA seq
352 aa
AA seq
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MGIKEDLVVTTAVNFVGNGNFLDSAFRYTLFPVFYGVVFILGLIANSYVLFVLWRLRDAK
ALNEICIYMANLTVADLLFVCALPVWIGYYHHGGVWLYGEFLCRVTGVFFFINTYCSILF
LTAISINRYWAITRPLNAASSDHWCRGVVVTAVIWVVTLSMSVPYLLKTGIQKDERNVSR
CFEGYHHETDGEKRLVAATHLIIVGCFVLVFFLVVVCNLLIARALLAQSLTQARGSSSSK
PRGVKGRALQMLCAVVGVFVVCFLPHHMVQGPWTLAVLEIKEGWGSTEWNQKTRQWLNDA
HQVTLMLMGLNCLLDPVVYCFATRRFHMYIKDHLKKVGMGRGCSETAITHIP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggggataaaagaggacttagtagtgaccacggctgtgaactttgtcgggaacggaaac
ttcctggactcggcgttccgctacaccctcttcccagtgttctacggtgttgtgttcatc
cttgggctgatagccaatagttacgtgctgttcgtgctgtggcgcctacgcgatgccaag
gccttgaacgagatctgcatctacatggccaacctgactgtggccgacctcctcttcgtg
tgcgccctccccgtctggattggctactaccatcacggtggcgtctggctctacggcgaa
ttcctgtgccgtgtcaccggcgtgttcttcttcatcaacacctactgctccatcctcttc
ctcactgccatcagtatcaaccgctactgggccatcacgcgcccgctgaacgccgcctcg
tccgaccattggtgccgtggggtggtcgtcacagcggtcatctgggtggtcactctgtcc
atgtctgtgccatacctcttgaagacgggcatccagaaggacgagaggaacgtgtcgcga
tgcttcgagggctaccaccatgagacagatggcgagaagcggctggtggccgcaacccac
cttatcattgtggggtgcttcgtcttggtcttcttcctcgtcgtagtgtgtaatctgcta
atcgcccgggcgttactagcccagtcccttacccaggctcggggctccagttcctccaaa
ccccggggggtgaagggccgggccctgcagatgctgtgcgctgtggtgggggtgtttgtg
gtgtgcttcctcccccaccacatggtccagggcccctggaccctggctgtgctggagatc
aaggagggctggggcagcacggaatggaaccagaagaccaggcagtggttgaacgacgcc
caccaggtcaccctgatgctgatggggctcaactgcctcttagatcccgtggtgtactgc
ttcgccaccaggaggttccacatgtatatcaaggaccatctgaaaaaggtggggatgggc
agaggctgctcggaaacagccatcacacacatcccatag
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