Salvelinus namaycush (lake trout): 120023889
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Entry
120023889 CDS
T07522
Name
(RefSeq) cannabinoid receptor type 1A-like isoform X1
KO
K04277
cannabinoid receptor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120023889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120023889
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Others
Cannabinoid
120023889
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
T4SS_CagC
Motif
Other DBs
NCBI-GeneID:
120023889
NCBI-ProteinID:
XP_038823920
UniProt:
A0A8U0PFB3
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Position
Sna29:25953999..25955405
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AA seq
468 aa
AA seq
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MKSVLDGVADTTFRTITSGLLYLGSNDASYDDATINTDFTKGGLSVQKPLPAFRSNSFPD
KVPGDEELILKGIPFFPTNATDLFGNSSGFGDEGTGIQCAENFVDMECFMILTPSQQLAV
TVMSLTLGTFTVLENLIVLCVILQSRTLRCRPSYHFIGSLAVADLLGSVIFVYSFLDFHV
FHRKDSPNVFLFKLGGVIASFTASVGSLFLTAIDRYISIHRPLAYRRIVTRTKAVIAFCV
MWTISIVFAVLPLLGWNCKQLNSVCSDLFPLIDEKYLIFWIGVTSVLVLFIIYAYMYILW
KAHHHAVRMLSRTSQKSLVVYSADGTKVQTMRPEQTRMDIRLAKTLVLILVVLVICWGPV
LAIMVYDLFWKMDDDIKTVFAFASMLCLLNSTVNPIIYALRSKDLRHAFLSSCQACRGSA
QQLDNSLESDCQSRHIAANRAAESCVKTTVKIAKVTMSVSTETSAEAV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgtgctggatggtgtggcagacaccaccttccggactataacctctggactg
ctgtaccttggctccaatgatgccagctatgatgacgccaccatcaacactgacttcact
aagggtggattgtccgtccagaagcctttacccgctttccgcagtaactctttcccagac
aaggtgcctggagatgaagaactcatcctaaaaggcattccattcttccctaccaatgcc
acagacctgtttggcaacagtagcggctttggtgatgagggaaccggaatccagtgtgcg
gaaaacttcgtggacatggaatgcttcatgatcctgactcctagccagcagttggctgtg
acggtgatgtccctcactctgggaaccttcaccgtgcttgagaaccttatcgtgctgtgt
gtgatcctccaatcccgcacactgcgctgccgcccctcctaccacttcataggaagcctg
gctgtagccgacctgcttggcagcgtcatcttcgtctacagcttcctggacttccatgtg
ttccacagaaaggacagccccaatgtgttcctcttcaagttaggtggggtcatcgcttca
ttcacagcctctgtgggaagcctgtttctcactgctatagaccgctacatctccatccac
agacccctggcctacaggcgcatcgtcacgcggaccaaggctgtcatcgccttctgcgtg
atgtggactatctccattgtcttcgcagtgctccctctgctgggatggaactgcaagcag
ctcaactcggtctgctcagaccttttcccgctaatcgatgagaagtatctgatcttctgg
atcggggtgaccagcgtgctggtcctcttcatcatctacgcttacatgtacatcctgtgg
aaggcccaccaccacgctgtgcgcatgctgagccgcacctcccagaagagcctggtggtg
tactcagcagacggaacgaaggtgcagaccatgcgccctgagcagacacgcatggatatc
cggctcgccaagaccctggtcctcatcctggtggtgctggtcatctgctggggccctgtg
ctggccatcatggtctatgacctgttctggaagatggatgatgatattaagacagtgttt
gcattcgccagcatgctctgtctgctcaactcaacagtcaacccaatcatttacgccctg
aggagcaaggacctgcgacacgccttcctcagctcatgccaggcgtgccggggcagtgcc
cagcagctggacaatagcctggagtctgactgccagagcaggcacatcgctgccaacagg
gctgcagagagctgtgtgaagaccactgtgaaaatagccaaagtgactatgtctgtctcc
actgagacatctgcagaagctgtttag
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