Salvelinus namaycush (lake trout): 120023996
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Entry
120023996 CDS
T07522
Symbol
rfx6
Name
(RefSeq) DNA-binding protein RFX6
KO
K19521
regulatory factor X 6
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120023996 (rfx6)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other basic domains
RF-X
120023996 (rfx6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
120023996
NCBI-ProteinID:
XP_038824014
UniProt:
A0A8U0PHQ6
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Position
Sna29:20423579..20429191
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AA seq
856 aa
AA seq
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MTVFSPTTLSEAEDTNETPSSEEDQDFVEYSKDLAFKQTTPRKSITQIIKDKKKQTQLTL
QWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTR
GHSKYHYYGIGIKESSAYYHLVYSGKGLTRFSGSKLKNEGGYTRKYSLSSKTGTLLPEFP
SVQHLVLQGSVSKEKVDTLIMMYKTHCQCILDNAINVNFEEIQNFLLHFWQGMPDHLLPL
LDNSVIVDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNLAKHWEDWMVSSLENLP
ECLSEKKLPIARRFVSSLKRQTSFLHLAQIARPALFDQNVVNSMVVDVDQVDLNSIGSQA
LFTISSGDQDSDLYSEYDSITAFQELKDLLKKNATVESFIEWLDTVVEQKVIKPGKQNGR
SIKKRAQDFLLKWSFFGARVMHNLTLNNATSFGSFHLIRMLLDEYILLAIETQFNNDKEQ
DLQNILDKYMRNADGSKAAFTASPSSCFLANRNKPSAVSSDLSVKNESLSEHTYMTLSAN
QQANMTYQGSETDGFSLSGQMDFSQNSGPLMTPPISPAMVNRGSVINQGPMAVIPQSACT
TIQPHISCQAFPDTMYQSLPSSSPSYYPTTSNYQAVFRPQTQAQAPAYHTRSDSSHYPSF
SEQHLAKDYFNSSCAVSPYSSRPTSNYSTAPDPGMETQGVPLLDSGGYNFVMSGLNSSGC
QESAYSTAGHRYYGNSGYLDSQRLGSMIDQHVSVISSVSSIRSVPTYADVHDPLNILDDT
GRKPAGPYYPESDSLGTPGAPPLPSSISAPCMYGGPAQFHSQDAPLPHQGPSEVRDMVSS
LPPINTVFMGSSGGGP
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgactgttttctcccccacaacactgtcagaagcagaggacactaatgaaaccccgtct
tctgaggaggaccaggattttgttgagtattccaaagatttggctttcaaacagactacc
ccgaggaaaagcatcactcagatcataaaggacaagaagaaacagactcagctcactctt
caatggctggaggaaaactatattgtttgtgaaggggtttgtctgccacgttgcatcctg
tacgctcactacctagacttctgtaggaaggagaaactggatccagcctgtgctgctaca
tttggcaagacaattcgtcagaaatttccacttcttacaacaagaagacttgggacccga
ggtcattcaaaatatcattattacggcattggcatcaaagagagcagtgcctattatcac
ttggtgtactcaggaaaaggcttgacgagattttcagggagcaaactcaagaatgaggga
ggatatactcggaaatactccctcagctccaaaacaggaactttgcttccagaattccca
agtgtacagcatctagtgcttcaaggttctgtctctaaagagaaggtggacacgctcatc
atgatgtacaaaacacattgtcagtgcatcctggacaatgccatcaatgtcaactttgaa
gagatacagaattttctgctgcatttctggcaaggaatgcccgaccaccttttaccactg
ctggataactccgtaatcgtggacatcttctgtgtgtgtgactctatactatataaggtt
ctgacagatgtcctgatccctgctacgatgcaggagatgcctgaaagtctcctggcagac
atccgtaacttggccaagcactgggaagactggatggtgtcttctctggaaaacctccca
gaatgcctctcagagaagaagctcccgatcgcacgcagatttgtgtcctctctaaagcgt
cagacctccttcttacaccttgcccagatcgcgagacccgctctttttgaccagaatgtg
gtgaactccatggtggtggatgtagatcaagtggatttgaacagcatagggtcacaagcc
cttttcaccatctcaagtggtgaccaagactctgacctctactctgaatatgactctata
acagcgttccaagagctgaaagacctactgaagaagaatgccactgtggaatcctttatt
gagtggctggacactgttgtggagcagaaggtcattaagcctgggaagcagaacggacgg
tctataaagaagcgagctcaggacttcctcctcaagtggagtttctttggagcacgtgtt
atgcacaacctcacgttgaacaacgccacaagttttggttcgttccacctaatccgcatg
ctgctggatgagtatatccttctggctattgagacacaattcaacaatgacaaagaacaa
gacctccagaatatcctagataaatacatgagaaatgcagatggcagcaaggcggcattc
actgcctcccctagctcctgtttcctggccaaccgtaacaagcccagcgcggtgtccagt
gatctgtctgtgaagaacgagtccctctcagaacacacatacatgaccctgtcagctaat
cagcaggcaaacatgacctaccaaggctctgaaacagatggattctctctgtcaggacaa
atggacttttcccagaacagtggccctctgatgacccctcccatctccccagccatggtg
aacaggggcagtgtcatcaaccagggccccatggccgtcataccccagagcgcctgcacc
accatccagccccacatctcctgccaagccttcccagacaccatgtaccagagcctacct
tccagtagccccagctactacccaaccacttccaactaccaggctgtgttcaggccccag
acacaggcccaggcccctgcctaccacacccgctccgatagcagccactacccgtccttc
agtgagcagcacctggccaaagactacttcaacagcagctgtgctgtgtccccctacagc
tccagacccacctccaattacagcacagcccctgatcctgggatggagactcagggggtt
ccgctactggactctggaggatacaattttgtcatgagtgggttaaacagtagtggctgt
caggagtctgcctactcaacagcaggacacaggtactatggaaacagtggctacctggat
agccagaggctgggttccatgatagaccagcatgtgtcagttatcagcagtgtgagcagt
atccgttccgtcccaacgtacgctgatgtacacgaccccctcaacatcctggatgacaca
ggcagaaagccggcaggcccttactaccctgagtctgactcactcggcacacctggagct
cctcccctcccctcctcgatctccgcaccctgcatgtatggaggtcctgcccagttccac
tcccaggatgcaccgcttcctcaccagggaccatctgaggtacgtgacatggtgtcatcg
ctgccacccatcaacactgtgttcatggggtctagtggaggaggaccgtga
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