Salvelinus namaycush (lake trout): 120024034
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Entry
120024034 CDS
T07522
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120024034
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
120024034
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
120024034
NCBI-ProteinID:
XP_038824053
UniProt:
A0A8U0PFJ1
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Position
29:complement(5015678..5035740)
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AA seq
670 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPAEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSACI
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEDDEDDELEQSAASW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHTMDPDNLELTFDFFEEDMG
EHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKHSLERFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMNL
FLDIILSCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRCR
TTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQADIFKVEEKHTLQETLNSFVCSCYSIPCQAPVCVTAAKVHNGS
AESDSGLSSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggctgaacacgatgggacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcagccacgtctgatgagccccaca
gaatcacaccttgatattgacgatggccaatttggattccacaacggctcagcgtgtata
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcactactccaagacg
tctcctgtctccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggatgatgaagatgacgagctggagcagagcgccgcgtcgtgg
cacaagatgaccactacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcccgagtgtggctacgccctggaggcctcacagtggacagagtacgtcatc
cacaccatggaccccgacaacctggaactcaccttcgacttttttgaggaagacatgggt
gagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctctcc
tcattcttcgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtcagagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgccccc
ctggacgtaggccacagaggggccggcagcacacacgcagccaaacataccaaagtcagg
gagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggagttt
gacgtccatctctccaaggactgtgtccctatcgtgtaccacgatctcacctgttgcatc
tccacgaagaagaaaggagacaagcactctttggagcggtttgaagttccggtgaaagat
ctcacatacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtgaac
gaccacaaagatgacgacgacgaggaagaggttgacgaacaccagcccttcccttcattc
tcacagatcttccatgcggtgcctgaaaatgtgggcttcaacatcgagctcaagtggatt
tgtcagatgaaggatggttcgtgggaaggaaacctgtcttcctacttcaacatgaacctg
ttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccctatc
ttgttcctgacccagggcatctctgagacctatcctgagctcatggacatccgctgtcgg
accacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcccac
acagaggagctgcttcagaacctggagcacatccgagaggcccaatctaaaggcctggtg
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctaagggagcag
ggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccgacatc
ttcaaagtagaggagaagcacactctgcaggagactctcaatagctttgtgtgctcctgt
tactccatcccctgccaggcgcctgtctgcgtcaccgccgccaaggttcacaacggcagt
gccgagtccgactcgggcctcagctcttcctga
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