Salvelinus namaycush (lake trout): 120024061
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Entry
120024061 CDS
T07522
Symbol
prox1a
Name
(RefSeq) prospero homeobox protein 1a
KO
K20211
prospero homeobox 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120024061 (prox1a)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
120024061 (prox1a)
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Gene cluster
GFIT
Motif
Pfam:
HPD
NifQ
DUF629
Nop25
Motif
Other DBs
NCBI-GeneID:
120024061
NCBI-ProteinID:
XP_038824095
UniProt:
A0A8U0PG29
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Position
Sna29:complement(3461038..3501765)
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AA seq
819 aa
AA seq
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MPDHDSDSFLSRQTKRRRVDIGVKRTVGSNAANAAAAATTSADIAHAKAAIFGAMNSLNS
HHHGSDADSMDCSMVQPHGHAGVVTATNSESKSNVLRKLLKRANSYEDAMIPFPGATIIS
QLLKSNMAKNGRGERGERGERGDREDGGFPRSGLSSGGSEAPQEDACSNSSQDSPQECLS
PFGHPPALGAFDLERLNDEHLRAKRARVENIIRGMSHSPGVVVPTRHLGERDHELEQCGR
EREREMDGDRDREMEMDCPPQPPSPRGEVCSRENKRKQRLPQQQQQSFTQLVCQRKEQKH
EERRQLKLQLEDMQKQLRQLQEKFFQIYDSTDDSEHDLAHDLGDMSEDSAGRSDAGGDDR
TDRSDNEMSDLDPGHFLDRARALLQEQALLAEGDKLRREGLVWGKVPGQGPSSSMHHAEG
KLLAETLKQELNSAMNQVVDTVVKVFAKPPRPTPPQVFPPLPMPPERFGVNVKGPNFHTA
NQRLQCFGDVIIPNPLDSFGSIPVPGANDQTEALPLVVRKTQTEHHHQSSAMGTHGGHHH
PSMHPSSLSTSMGFSPPSFRHPFPLPLMGYPFQSPLGPPSGGYPGKDRSSPDSMDLSRET
TSLRTKMSSGHHVGHHHRSFSPTNPGSTAEGLSLSLIKSECGDMSDMNDISPYSGSTIQE
GLSPNHLKKAKLMFFYARYPSSNMLKIFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKF
ARQAINDGVTGVEEMSVSRDCELYRALNMHYNKANDFEVPELFLEVATITLREFFNAIVA
GKDVDPSWKKAIYKVICKLDNEVPEVFKSPNCLQELLHE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccggaccatgacagcgactccttcctgagcagacagaccaagagaagacgagtggac
atcggggtgaagaggactgtgggcagcaacgccgccaacgcagcagcagcagccacaacc
agcgccgacatcgcccatgccaaagcagcaatcttcggtgctatgaactctctcaactcc
caccaccatggctccgatgcagactccatggactgctccatggtgcagccgcacggccac
gccggcgtcgtcacagcaaccaatagcgagtccaagtccaacgtgctccggaagctcctg
aagagagccaactcgtatgaagacgccatgattcccttccccggcgccactatcatctcc
cagctcctcaagagcaacatggccaagaacggaagaggagagagaggggagaggggggag
agaggagatagagaggatggggggttccccaggtcaggcctctccagtgggggttccgaa
gccccccaggaggacgcctgcagtaattcgtcccaggacagcccccaggagtgcctgtcc
ccctttggccatcccccggctctgggcgccttcgacctagagcgcctcaacgacgagcac
ctccgggccaagcgtgcccgcgtggagaacatcatccggggcatgagccactcacccggc
gtggtggtgcccacacgccacctcggagagcgggaccacgaactggaacaatgtggacgg
gagagagagcgagagatggacggtgacagggacagagaaatggagatggactgcccccca
cagccgcccagccccaggggagaggtgtgcagccgggagaacaaaaggaagcagcgcctg
ccccagcagcagcagcagagcttcacccagctggtgtgccagcgtaaagagcagaagcat
gaggagcgcaggcaactaaagctgcagctggaggacatgcagaagcagctgcgccagctg
caggagaagttcttccagatctacgactccaccgacgactcagagcatgacctggcccat
gacctaggcgacatgtctgaggacagtgctgggaggtctgatgctgggggagatgaccgg
acagaccgttccgacaatgagatgtcagacctggatccgggacacttcctggaccgagca
agggcgttgctccaggagcaggccctgctggctgagggggacaagctcaggagagagggg
ctggtctgggggaaagttcctggtcagggcccctcctcctccatgcaccatgcagagggc
aagctgctggctgagacgttgaaacaggagcttaactcggcaatgaaccaggtggtggac
acagtggtcaaggtgtttgccaagccccctcgccccacaccaccccaagtcttccctccc
ctccccatgcccccagagaggtttggtgtcaacgtcaagggccccaacttccacacagcc
aaccagcgcctgcagtgctttggcgacgtcatcattcccaatcccctggactcgttcggc
agcatacctgtgcccggcgccaacgaccagacggaggcactgcccctggtggtgaggaag
acgcagacggagcaccatcaccaatcctcagccatgggcacccacgggggccatcaccac
ccctccatgcacccctcctccctctctacctccatgggcttcagccccccttctttccgc
cacccctttccccttcctctcatgggttaccccttccagagccctctgggcccaccctcc
gggggttacccagggaaggaccgttcctccccagactccatggacctgtccagggagacc
accagcctgcggaccaaaatgtcatcagggcatcacgtggggcaccaccaccggtctttc
tctccgaccaaccctgggagcactgcagaggggctctccctgtccctcatcaagtcagag
tgtggagacatgagcgacatgaacgacatctcaccatactcaggcagcaccattcaggag
ggtctttcccccaaccacctgaagaaggccaagctcatgttcttctacgcccgttacccc
agttccaacatgctcaagattttcttctccgacgtcaagtttaaccgctgcatcacatcc
cagctcattaagtggttcagtaacttccgggagttctactacatccagatggagaagttt
gcccggcaggctatcaacgacggtgtcaccggagtggaggagatgagcgtcagccgcgac
tgtgagctctaccgagccctcaacatgcactacaacaaggccaatgactttgaggttcca
gagctgttcctggaggtggctacgatcacgctgcgtgagttcttcaacgccattgtggcg
ggcaaagacgtggacccatcctggaagaaggccatctacaaggtgatctgcaagctggac
aacgaggtgcccgaggtctttaagtcacccaactgtctccaggagctcttacacgagtaa
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