Salvelinus namaycush (lake trout): 120024070
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Entry
120024070 CDS
T07522
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa-like
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120024070
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120024070
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120024070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
I-set
Tc-R-P
ig
Ig_3
Y_phosphatase3
Ig_2
PTPlike_phytase
EphA2_TM
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
120024070
NCBI-ProteinID:
XP_038824109
UniProt:
A0A8U0TPA2
LinkDB
All DBs
Position
Sna29:22849229..23045496
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AA seq
1431 aa
AA seq
DB search
MDTCRLGFILLYFSILSVGAQFTTGGCTFDDGPAQCDYQQDPYDDFDWTHVSAQEVPYLS
SELPQGSYMMVDSSQHDAGEKARIQLPVMKENDTHCIDFNYLLYTQDGSSPGTLNILVKV
NKGPLANPIWNVTSYTGKDWLRAELAVSTFWPNEYQVIFEAEVSDGKTGFIAIDDIQVLS
YPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDTVNNRLWLQRRNGEDIPVASTKNINHR
RFAASFRLKEVTSLDQDLYRCVTQSERGSGVSNFAGLIVREPPRPIAPPQLLGVGPTYLL
IQLNANSIFGDGPIILKEVEYRMTSGIWIETHAVNSPNYKLWHLDPDTEYEIRVLLTRPG
EGGTGQPGPPLITRTKCAEPMRTPKRLKIAETQARFIAVDWESLGYNITRCHTFNVTICY
RYYNANNQTKADCLDMDPKAPRHVVGNLPPNTNVSLKMILTNPEGRKESDETIIQTDEDV
PGPVPSQSMKATPFEDRIFLYWKEPLEPNGIITQYEIAYSGIRSFDPSVPIMRPPLIVSL
PWNTSHHVFNQLHPGTTYQFIIRASTVKGFGPPTTLNVTTNISAPTLEEYDGSEAFLNET
ATTITVLLKPAQAKGAPISAYQIVVEELNPHRTRREASSVDCYQVPVPFHSASSGGSPYY
FAAELPPGNLPEPSPFTVGDNKTYHGFWNPPLAPRKNYNIYFQAVSSVEKESKTQCLRLA
TKGATEEPEVIPDPAKQTDRVVKIAGISAGVLVFILLVLVAILLVKKRKLAKKRKDAIGN
TRQEMTHMVNAMDRSYADQSTLHTEDPMAVTFMDSHNFSNRYENHTAAAAESSRLLDVPR
YHCEGTESPYQTGQLHPAIRVADLLQHINLMKTSDSYGFKEEYESFFEGQSASWDVAKKD
TNRTKNRYGNIIAYDHSRVILQPMEDDPSSDYINANYIDGYQRPSHYIATQGPVHETVYD
FWRMVWQEQSACIVMVTNLVEVGRVKCYKYWPDDAEVYGDFKVTFVEVEPLAEYVVRTFT
LERRGFNELREVKQFHFTGWPDHGVPYHATGLLSFIRRVKISNPPSAGPIVVHCSAGAGR
TGCYIVIDIMLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACLCGETA
IPACEYKAAYYDMIRIDSQSNSSHLKDEFQTLNSVTPQPQPEDCSIALLPRNHEKNRFMD
MLPPDRCLPFLITIDGESSNYINAALMDSYRQPAAFIVTQHPLPNTVKDFWRLVYDYGCT
SLVMLNEIDLAQGCPQYWPEEGMLRYGPVQVECMSCSMDCDVISRLFRICNLTRPQEGYL
MVRQFQYLGWAAHREVPASKRSFLKLILQVDKWQEECEEGEGRTIIHCLNGGGRSGMFCA
ISIVCEMIKRQNVVDVFHAVKSLRNSKPNMVDSPDQYRFCYDLALEFIETS
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtgtagacttggcttcatactactctacttttcaattctaagcgttggggct
caatttacgacaggtggctgtacatttgacgatggcccagcccagtgtgactaccagcag
gatccctatgacgactttgactggacccatgtcagcgcacaggaagtgccatacttgtca
tctgaactgccccaaggttcctacatgatggtggactcctcccagcacgatgccggagag
aaggcccgcattcagctgccagtaatgaaggaaaacgacacccactgtattgacttcaac
tacttattgtacacccaagatggctccagcccggggacgctgaacatcctggtgaaggtt
aacaaaggtcctctggctaatcccatctggaatgtgaccagctacaccgggaaggactgg
ctccgggctgagctggccgtcagtaccttctggcctaacgagtatcaggtcatatttgag
gcggaggtctcggacgggaagaccggcttcattgcgattgatgacatccaggttttgagc
tatccatgtgataaatcgcctcacttcctgcgcctgggagatgtggaagtcaacgccggg
cagaacgccaccttccagtgcatcgccaccggccgggataccgtgaacaacaggctgtgg
ctgcagaggagaaatggggaagacattcccgtggcgtcgactaagaacatcaaccacagg
cggttcgctgcctcgttcagactcaaggaagtgactagtctggaccaagacctttaccga
tgtgtcacccagtcagagagaggatctggtgtgtccaacttcgccggactcatcgtcaga
gaacccccgcggcctatcgcaccccctcagctgctgggcgtggggcccacctatctcctg
atccagctcaatgccaactccatattcggagacggccccatcattctgaaggaggtggag
tatcgcatgacatcagggatctggatagagacccatgctgtcaactcccctaactacaag
ctgtggcacctggacccagacacagagtacgaaatccgtgtgctgctcaccagaccaggg
gaggggggcaccggccagcctggaccacctctcatcaccaggacaaagtgtgccgagccg
atgcggaccccgaagagactgaagattgcggagacccaggccagattcatcgctgtggac
tgggagtctctgggctacaatatcacccgctgccacaccttcaacgtcaccatctgctac
cgttactacaacgccaacaaccagaccaaggccgactgcctggacatggaccccaaggcc
ccacgccatgtggtgggcaacctgccccccaacaccaatgtcagcctcaagatgatcctg
accaaccccgaaggacgcaaggagagcgacgagaccatcatccagacagatgaagatgtg
cctggccccgttccaagccagtccatgaaagccacaccgtttgaggatcggatcttcctt
tactggaaggaaccactggagcccaatgggatcataactcagtatgagatcgcctacagt
ggtattcggtcctttgacccctcggtgccgataatgcgcccccctctgatcgtgtctctg
ccctggaacacttctcatcacgtcttcaaccagctgcaccctggcaccacctaccagttc
atcatacgagccagcaccgtcaagggcttcggccccccgaccacactcaacgtcaccacc
aacatctcagccccaacactggaagagtatgatgggtccgaggcgtttctgaatgaaacg
gccaccaccatcaccgtcctactgaagcccgctcaggccaaaggtgcccctatcagcgct
tatcagatcgtggtggaggagctgaacccacatcgcacacgcagggaggccagctccgtg
gactgctaccaggtcccagtccccttccacagtgcctccagtggtggctcgccttattac
tttgcggcagaactgccaccagggaaccttcccgaaccctctccgttcacggtgggcgac
aacaagacgtaccatggcttctggaaccctccgctcgcccccaggaagaactataatatc
tacttccaggccgtcagcagtgtggagaaggaatcaaaaacgcaatgtctgagacttgca
acaaaaggagctacagaggaaccagaggtgatcccggacccagccaagcagacagacagg
gtggtgaagattgctggcatcagtgctggggtgctggttttcatcctactggtgctggtg
gccatccttctggtcaagaagaggaaactggccaagaagcgcaaagatgccattgggaat
actcgtcaggaaatgactcacatggtgaatgccatggaccgcagttatgctgatcagagc
acgctccacactgaggatcccatggccgtcacattcatggactcccacaacttcagcaac
agatatgagaaccacactgcagctgctgcagagtccagtcggctgctggacgtccctcgg
taccactgtgaggggacagagtcgccctaccagaccggtcagctgcacccagccatcagg
gtggctgacctgctccaacacataaacctgatgaagacctccgacagctacggcttcaag
gaggaatatgagagtttttttgaaggccagtccgcttcctgggacgtggcaaagaaagac
actaacagaaccaagaaccgctatggaaacatcattgcatacgatcattctagagtgatc
ctgcaaccaatggaagacgacccttcctctgactacatcaacgccaactacattgacggg
tatcagaggccaagtcattacattgcaactcaagggcctgtccatgagacagtctatgat
ttctggaggatggtctggcaagagcagtctgcctgtatcgtcatggtcaccaacctcgtg
gaagttggacgggtgaagtgttacaagtactggcccgatgatgctgaggtctatggtgat
ttcaaagtgacgtttgtggaagtggagccccttgctgaatatgtggtcagaacgttcacc
ttggagaggagaggctttaacgagctgcgcgaggtgaagcagtttcatttcactggctgg
cctgaccacggagtgccctaccacgccacgggcctcctctccttcatccgccgggtcaag
atttccaacccccccagcgctgggcccatcgtggtgcactgcagcgccggagccggacgc
acaggctgttacatcgtcatcgacatcatgctggacatggcggagagggagggcgtggtg
gacatctacaactgtgtgaaggccctgcgctccagacgcatcaacatggtacagactgag
gagcagtacatcttcatccatgacgccatcctagaggcctgtctgtgtggcgagacggcc
atccctgcctgcgagtacaaagcagcttactacgacatgatcaggatagactcacagagc
aactcctcacacctcaaagatgaattccagacactgaactcggtgacccctcagccccag
ccagaggactgcagcatcgccctgctccccaggaaccacgagaagaaccgcttcatggac
atgctgcctccagaccgctgtctgcccttcctcatcactatcgacggggagagcagtaac
tacatcaatgctgccctcatggatagctacagacagccagcagccttcatcgtaacccag
caccctctgcccaacacagtcaaggacttctggaggctggtgtatgactatggctgcact
tccctggtgatgctcaacgagattgacctagcgcagggctgccctcagtattggcctgaa
gaggggatgctccgctacggtcctgtccaagttgaatgcatgtcctgctccatggattgt
gacgtcatcagccgtctcttcagaatatgtaacctcactagacctcaggagggctatctg
atggtgaggcagttccagtacctgggctgggcagcccacagagaagtcccagcatcaaag
cgttccttcctgaagctcatactgcaggtggacaagtggcaggaggagtgtgaagaggga
gagggacgcacaatcatccactgcctaaatggaggcgggcgcagtgggatgttctgtgct
atcagcattgtgtgtgagatgatcaagaggcagaatgtggtggacgtgttccatgcagtc
aagagcctgaggaacagcaagcccaacatggtggacagcccggatcagtaccgcttctgc
tacgaccttgctctggagttcatcgagacctcttaa
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