Salvelinus namaycush (lake trout): 120024078
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Entry
120024078 CDS
T07522
Name
(RefSeq) heat shock factor protein 2-like isoform X1
KO
K09415
heat shock transcription factor 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120024078
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120024078
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
Motif
Other DBs
NCBI-GeneID:
120024078
NCBI-ProteinID:
XP_038824125
UniProt:
A0A8U0PG50
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Position
Sna29:21555056..21561797
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AA seq
503 aa
AA seq
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MKQNSNVPAFLTKLWTLVEDSDTNEFICWSQEGNSFLVMDEQRFAKDILPKFFKHNNMAS
FVRQLNMYGFRKVMHIDTGIVKQERDGPVEFQHHYFKHGQDDLLENIKRKVSNARPNDTK
IRQEDLSNILASVQNVHGKQESIDSRLNTLKRDNEGLWREISDLRQKHSQQHQIIKKLIQ
FIVTLVQKNRMSLKRKRPILLNSNGKKPKYIHEIYDDPPLDHNKPSVSGLKNADLTDDVV
ICDVTDDDTEITEGPSRALDQSDVEIVEVFNSNTVSQTDNADSIGQTYSLVIEPEETTIS
TYDSLPTSSTLQLNKQSGLSLEDPMKMMDSILNESGAISQNINLLGKVELMDYLDSIDCS
LEDFQAMLYGKQFSIDPDILEATEGSGGPKENAGLLSKGDKSSFSADNQLVQYTSCPLLA
FLDGCTPLATEADSSTATELGNSLLQHNTEVPTDLLEPDEEPPRSSLIRLEPLTEAEASE
STLFYLCELNPEGDTTDLTQLEI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaattcaaatgtaccagcctttctcaccaagctttggactcttgtggaagat
tctgacacaaatgaatttatttgttggagtcaggaaggtaacagtttccttgtcatggat
gaacagcgatttgccaaggatatccttcccaaattcttcaagcacaacaacatggccagc
tttgtcagacagctgaatatgtatggatttcgcaaagtgatgcacatcgacacaggcata
gtaaagcaagagagggatggaccagttgaatttcagcatcattactttaaacatggtcag
gatgacttgctggaaaacatcaaaagaaaggtttccaatgcaagaccaaatgataccaag
atcagacaggaagacctgtccaatattttggccagtgttcagaatgttcacggaaaacaa
gaaagcattgattccagactcaacacactgaaaagagataatgaaggtctatggagggaa
atatcagacctgagacagaagcactcccaacagcaccaaatcattaagaagttgatacaa
ttcatcgtcacattggtacagaagaaccggatgagtttaaaacgcaagaggcctattcta
ctgaacagcaatggaaagaagcctaaatacatccatgaaatctacgatgatcctcctctg
gaccacaacaaaccctctgtcagtggtttgaagaatgctgatcttactgacgatgtcgtc
atctgtgatgtaactgacgatgacacagagatcacagagggcccctcaagagcattggat
caatcggatgtagaaatagttgaggtcttcaacagcaatactgtgtcacagacagacaac
gctgacagtataggacagacctactctttagtaatcgaaccagaagagaccaccataagc
acatatgatagccttcccacaagcagcaccttgcagctcaacaaacagtcagggttgagc
ctggaggatccaatgaagatgatggactcaatcctcaatgagagtggagctatttctcag
aatatcaacctcctcggcaaggttgagctgatggactacttggacagcattgactgcagt
ttggaagactttcaggcaatgttgtacgggaagcagttcagcattgatccagatatttta
gaggccacagaggggagtggtggtcccaaagaaaatgcagggctgctatccaaaggagac
aagtctagtttctcagcagacaaccagctggtccagtacacatcctgccctctgctggcc
ttcctggatggctgcacccctttggccacagaggcagacagcagcacagccacagagctg
ggaaacagcctgctgcagcacaacactgaggtccccacagacctcctggagccagacgag
gagcctccacgaagctctctgatccgcctggagcccctgaccgaggcagaggccagcgag
tcaacgctcttctacctgtgtgaactcaacccagagggcgacaccactgacttgacacag
ctggagatttaa
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