Salvelinus namaycush (lake trout): 120024153
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Entry
120024153 CDS
T07522
Name
(RefSeq) NF-kappa-B inhibitor alpha-like
KO
K04734
NF-kappa-B inhibitor alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04210
Apoptosis
snh04519
Cadherin signaling
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04622
RIG-I-like receptor signaling pathway
snh04623
Cytosolic DNA-sensing pathway
snh04625
C-type lectin receptor signaling pathway
snh04920
Adipocytokine signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120024153
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120024153
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120024153
04621 NOD-like receptor signaling pathway
120024153
04622 RIG-I-like receptor signaling pathway
120024153
04623 Cytosolic DNA-sensing pathway
120024153
04625 C-type lectin receptor signaling pathway
120024153
09152 Endocrine system
04920 Adipocytokine signaling pathway
120024153
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120024153
09171 Infectious disease: bacterial
05132 Salmonella infection
120024153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120024153
04131 Membrane trafficking [BR:
snh04131
]
120024153
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
120024153
Membrane trafficking [BR:
snh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120024153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
120024153
NCBI-ProteinID:
XP_038824239
UniProt:
A0A8U0PI64
LinkDB
All DBs
Position
29:complement(29928434..29930940)
Genome browser
AA seq
314 aa
AA seq
DB search
MDVYRVSNDNQMDYNVDERVSKHGKMIPSQEDRFDSGLDSLKDDEYGNLVKELEDLRVAP
VEVMSNSCSNEPWRKTVTEDRDTFLHLAIIHEATEHAEHMIKLSHNDDLFLDAQNNQRQT
ALHLAVITEQPHLVERLLKAGCDPRIADDSGNTALHIACKKGSLTSFSVITQNCPRHLRS
ILTFPNYSGHNCLHLASINGYLSMVESLVQLGADINAQEHCSGRTALHLAVDLQNPSLVH
RLLSMGADVNSVTYGGYTPFHLTYGRQNAEIHHQLYEKTAQELRELPESESEESEEECLS
GDEQMYDDITFGQN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttatagagtttcaaacgacaaccaaatggattataacgtcgatgaacgggta
tcgaaacatggcaaaatgatacctagccaagaagaccgttttgatagcggtctggattcg
ctaaaagacgatgaatatggtaaccttgtgaaggagctggaggacttgagagtggccccc
gtcgaagtcatgtcaaactcctgcagtaatgaaccctggaggaaaacagtgaccgaggac
agagacacgtttctccacctggccattattcatgaagccacagaacatgctgagcacatg
atcaaactgtcacacaatgatgatctattcctggatgcacagaacaatcagagacagacg
gcgctccatctggcagtgatcacagaacaaccccatctggtagagaggctactaaaggct
gggtgtgacccacggatagcagacgacagtgggaacaccgccctccacatcgcctgtaag
aagggctctctcacctccttcagtgtgatcacccagaactgcccccgccacctccgctcc
atcctcaccttcccaaactacagcggacacaactgcctccacctcgcctccattaacgga
tacctctccatggtggagagtctagttcagcttggtgccgatatcaatgcacaggaacat
tgtagcggtcgtacagcgcttcacctggctgtggacctccagaacccatccctggtccac
cggctcctctccatgggggcagacgtcaacagtgtgacatacgggggctacacgcctttc
cacctgacctacgggcgtcagaatgctgagatccaccaccagctgtatgagaagacggcc
caggaactcagagagctgcctgagagcgaatcagaggagagtgaggaggagtgcctgtct
ggtgatgaacagatgtacgatgacattacatttgggcagaattga
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integrated database retrieval system