Salvelinus namaycush (lake trout): 120024222
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Entry
120024222 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120024222
04082 Neuroactive ligand signaling
120024222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120024222
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120024222
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
120024222
NCBI-ProteinID:
XP_038824344
UniProt:
A0A8U0PID3
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Position
Sna29:25729104..25763287
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AA seq
418 aa
AA seq
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MTKTTMTKSEQLLSINDHDFTMRPGFGGHTVQVGVDVQVESLDTISEVDMDFTMTLYIRH
YWKDERLSFHSTTNKSMTFDGRLVKKIWVPDLFFVHSKKSFTHDTTTDNVMLRVYPDGKV
LYSLRVTVTSMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNNSLSTDERISLS
QFLIQEFHTTSKKSFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWID
RRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVN
YLSTVQERKERKLRERSVSQSLPCTCGMTHPGMMGSYSEDDVNNTGNYGGEPMENGAAMQ
QRMMVHLDFEENDQITGHVGSSAYSSMWIDTHAIDKYSRVIFPGSYILFNIIYWSCYL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaccaccatgacaaagtcagagcagcttttaagcataaatgaccacgacttc
acaatgaggcctggctttggaggacacactgttcaagttggagttgatgttcaggtagaa
agtctggacacaatctcagaagttgacatggacttcaccatgaccttgtatattaggcac
tactggaaagatgagcgcctttctttccacagcaccaccaataagagcatgaccttcgac
gggcgcctggtcaagaagatctgggtgccagacctgttctttgtccactccaagaagtct
ttcacacacgacaccaccacagataatgtcatgctgagagtctaccctgatggcaaggtg
ctctacagcttaagggtgacggtgacatccatgtgcagtatggacctgagtcgcttccct
ctggacacacagacctgctccctggagatcgagagctatgcgtacacagatgacgacctg
atgctctactggaagaaagggaacaattccctgagtactgacgaaaggatctccctctcc
cagttcctcatccaggagttccatactaccagcaaaaaatccttctacagcagcacaggc
tggtacaaccgtctgtacatcaacttcaccctgcgacgccacatcttcttcttcctgctg
cagacctacttccctgccactctgatggtcatgttgtcctgggtgtctttctggatcgac
cgccgggccgtaccggccagggttcctctgggtatcaccacggtgctcaccatgtccacc
atcatcactggagtcaacgcctccatgcccagggtttcctacatcaaagctgtggacatt
tacctctgggtcagttttgtgtttgtgttcttatcggtgatagagtacgctgcagtgaac
tacctgtctacagtgcaagaacggaaggaaagaaagctacgagaaaggtctgtttctcag
tctctgccctgcacctgtggcatgacccacccaggcatgatgggtagctacagcgaggat
gatgtcaacaacactgggaactatggcggtgagccgatggagaacggcgctgcaatgcag
caaaggatgatggtccatctggactttgaggagaacgaccagatcacaggacacgtgggc
tccagcgcttacagcagcatgtggatcgacacccacgccatagacaagtactcccgggtc
atcttccctgggtcctatattctgttcaacatcatctactggtcctgctacctctaa
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