Salvelinus namaycush (lake trout): 120024233
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Entry
120024233 CDS
T07522
Name
(RefSeq) paired box protein Pax-1-like
KO
K09382
paired box protein 1/9
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120024233
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120024233
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
Motif
Other DBs
NCBI-GeneID:
120024233
NCBI-ProteinID:
XP_038824354
UniProt:
A0A8U0TQW3
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Position
Sna29:27192234..27196135
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AA seq
353 aa
AA seq
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MDQTYGEVNQLGGVFVNGRPLPNSIRIRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADAVCDKYNVPSV
SSISRILRNKIGNLSQPGQYENSKPTHPQLSYNHMYPYSYPSAMSPTGTKIGSGHGVPIT
AGHVSLSRHGWPSVHTVSNILGIRAFMDPSAIAGAEGYQSKMEEWASVNRATFSSAHGVN
GIEKSSLEADIKYHQSSSNLSSYVPACAYSPPNQYGVYGGPAANYMTTGHHWQSQSASLA
HPNSGATMQGGDLHTAMSFKHSSREGDRKPHSPLSKHQHEALNVHGLSLPTSA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacatatggagaagtaaaccagcttggcggggtatttgtcaacgggcgacca
cttccaaattcgattcggatcagaatcgtggaattagctcaacttggaatacgaccctgt
gacatcagtagacagcttcgagtctctcatggctgcgtgagcaagatactagcgaggtat
aacgagacgggttcgatattgcccggtgccataggaggaagtaaaccccgggtcacaaca
cccaacgtggtgaaaagcataagggattacaaacaaggagaccctggaatatttgcttgg
gagatcagggacaggcttcttgcagatgcagtttgtgataaatataacgttccctccgtc
agctccataagccgcattttacgcaacaaaataggaaatctttctcagccgggccagtat
gagaacagcaagccaacccatcctcagctatcctacaaccacatgtacccgtactcatac
cccagtgcaatgtcacccactgggactaaaattggcagcggtcacggtgtacccatcaca
gcgggccatgtcagcctctcccgtcatggatggccttcggtgcacacagtcagcaacatt
ttgggcattcgagccttcatggacccctcagccattgctggagcagaggggtaccaatca
aaaatggaggagtgggcgagcgttaacagagcgactttttcctctgcccatggcgtcaac
ggaatagagaaatcctccctagaggcagacattaagtatcatcagtcttcttcaaaccta
tctagttatgtacctgcttgtgcctactctcccccaaaccaatacggggtgtatggtggg
ccagcagctaactacatgacaacaggacaccactggcagtctcagagcgcaagcctggcc
caccccaacagcggagcaaccatgcaaggtggagacctccacacggcaatgtctttcaaa
cactcatcacgagaaggagacagaaaacctcacagtcccttgagcaagcaccagcacgag
gcgttgaacgtacacggactctccctcccgacctcagcttaa
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