Salvelinus namaycush (lake trout): 120024240
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Entry
120024240 CDS
T07522
Symbol
efhc1
Name
(RefSeq) EF-hand domain-containing protein 1
KO
K23029
EF-hand domain-containing protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120024240 (efhc1)
04812 Cytoskeleton proteins [BR:
snh04812
]
120024240 (efhc1)
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120024240 (efhc1)
Cilium and associated proteins [BR:
snh03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120024240 (efhc1)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120024240 (efhc1)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
120024240 (efhc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DM10_dom
Motif
Other DBs
NCBI-GeneID:
120024240
NCBI-ProteinID:
XP_038824362
UniProt:
A0A8U0PHF6
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All DBs
Position
Sna29:29167110..29187145
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AA seq
561 aa
AA seq
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MSINTGHGLPFLPGNTFRDVTKSAHHRPQTLSYKNGYALPHRPKVGIGQAPLLSSELTQS
EINQFSNQTSALTYGTTHYSPALDFIPAHVAYDKKVLRFYGYFQQEVLHSPLEGYRVRPV
VLYYYLEDDSMCIMEPVVENSGIPQGKLIKRQRLPKNDRGDHYHWKDLNVGMDLVVYGTV
YRVTHCDSYTQDFMESEGLVLSDPEPTPVDPYIQRRTQAGRSYITPSVFDRLKQFLTMDR
KVLRFFALWDHTDTLYGEARPVTIQYYLVDDSVEIREVHEPNSGRDPFPVLLRRQRLPKN
IKPACKPFPSCVLEVSPQEVHQYYSPKDFQVGETLQLMGRRFLLYDCDEFTKTYYQKNHP
DLELKPKPVVKKSTELHDRHEVPPYNGFGSLEDSLQNCLSLIPEPPKKDLMKMLENDHKV
LRYAARMDSQNPQDEGRCFIFSYFLSSDMISIFEKSTRNSGIISGQFLEKTRIPKPGCTV
DKPEFYGPADFAIGDTVEVFRHRFVLTDADHYVLKYLESISDELPSRTLNSLRQRLGVVD
QEVDPHTDPQSEDIERAEASS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaacacgggacatggcttgccatttttgccaggaaacacctttcgggatgtt
acgaagtcagctcaccatcgtcctcaaaccctgtcctataagaatggctatgccctgccg
caccggcccaaggttggcatcggacaagcccctctcctgtccagtgagctgacccagagt
gagatcaaccagttttccaatcagacgtctgctctcacctatggcaccacccactacagc
ccggcactggacttcatccctgctcatgtcgcttatgacaagaaggtgctgcgcttctat
ggctacttccagcaggaggtgctgcactcgcccctggagggttaccgcgtgcgccctgtg
gtcctttactactacctggaggacgacagcatgtgtatcatggaaccggtggtggagaac
tctgggataccacagggcaagctgatcaagcgccagaggctgcccaagaacgaccgcggc
gaccactaccactggaaagatctcaacgtgggcatggacctggtagtgtacggcaccgtc
taccgcgtcacacactgtgacagctacacacaggacttcatggagagcgagggtctggtt
ttgagcgaccctgagccgaccccggtcgacccgtacatccagcggcgcacccaggctgga
cgctcctacatcaccccatctgtcttcgaccgcctcaagcagttcctcaccatggaccgc
aaggtgctgcgtttctttgcgctgtgggaccacactgacactctgtacggggaggccagg
cctgtgacaatccagtactatctggtggatgactcagtggagatccgagaggtccatgag
cccaacagtggccgggaccccttccctgtgctgctacgcagacagaggctgcccaagaac
atcaaaccagcctgcaagcccttccctagctgtgtactggaggtgtccccccaggaggtg
caccagtactactcgcccaaggacttccaggtgggcgagacgctgcagctgatgggccgg
cgcttcctgctctacgactgtgacgagttcaccaagacctactaccagaagaaccacccc
gacctggagctcaaacccaaacctgtggtcaagaagagcacagagctgcacgacaggcat
gaggttcctccctacaatggttttggttcactggaggactcccttcagaattgcctgtct
ctgatccctgagccccctaagaaggatctgatgaagatgctggagaatgaccacaaagtt
ctgcgctacgctgccaggatggactcccagaatccccaggacgagggccgctgcttcatc
ttctcctacttcctgtccagtgatatgatcagcatcttcgagaagtccacgcgcaactcc
ggcatcatcagcggccagttcctggaaaagacacgcatccccaagccgggctgcaccgtg
gacaagcccgagttctatggcccggccgactttgccatcggagacaccgtggaggttttc
agacaccgctttgtactgaccgatgctgaccactacgtgctgaagtacctggagtccatc
tcggatgaactcccctctcgcaccctgaactccctgagacagaggctgggcgtggttgac
caggaggtggacccccacaccgacccgcagtcagaggacattgaaagagcggaagcctct
tcttga
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