Salvelinus namaycush (lake trout): 120024248
Help
Entry
120024248 CDS
T07522
Symbol
capn3b
Name
(RefSeq) calpain-3b
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120024248 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120024248 (capn3b)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
120024248 (capn3b)
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C2: calpain family
120024248 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
120024248
NCBI-ProteinID:
XP_038824370
UniProt:
A0A8U0PG52
LinkDB
All DBs
Position
Sna29:31097651..31132533
Genome browser
AA seq
794 aa
AA seq
DB search
MFGAGAAHTDRGNEDTHKGKNKAKMALIEETSVKVALETEASPDVPEGKTDYPFTASNSI
YTAILSRNEAVKDAKRLKNFLELRDKYVHKKVLFEDPLFPPNDSSLWYSSKFPIEFEWKR
PTEICDNPQFIIDGASRTDICQGELGDCWLLAAIACLTLNDKLLYRVIPPDQSFTENYAG
IFHFQFWRYGEWVDVVVDDRIPTSNNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKG
GNTLEAMEDFTGGVTEFFEMSEAPKELYKIMKKALERGSLMGCSIDALLPSHCETETANG
LVRGHAYSITALEECDKLKVTKDTKIRLVQMRNPWGMVLWKGPWNAKSKEWSTISSSDKA
RLKKKTVETSETWISFEDFKKNFTKLEICNLTPDTLLDDKSHSWTVAVNEGRWVRGSSAG
GCRNFPDTFWTNPQYRMRLYEEDDDPDDPEHVACTVMVALMQKGRRKDRSKGAKLYTIGF
SIYEVPKEMIGSQQHLQKDFFLYNASNAKCKSYINLREVSERFCLPPGEYVIIPSTFDPH
EEGEFILRVFSEKNSTSEETENTIRSDHIEQGKNRTKKGKPIVFVSDRAKANKEIEQDDI
EVQKEKKEKVKPKPQQPDEESGEHKMFRAIYQQIAGEDMQICANELKVVMKRVLEKHNDM
KTDGFSLESCRSMIALMDTDGTGKLNLQEFKHLWSKIKAWQLIFKKYDKDKSSTISSFEM
RNAVNDAGFRLNNQLYDIITMRYADEHLNIDFDSFICCFVRLEGMFRTFHAFDKNGDGTI
KLNVLEWLQLTMYA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagcgggggcagctcacactgatagggggaacgaggacacgcataaggggaaa
aacaaagccaagatggcccttattgaggaaacttcagtgaaggtggcgttggaaactgaa
gcatcacctgatgtgcctgagggtaagactgactaccccttcacggccagtaacagtatc
tacactgccattttgagcagaaacgaggccgtcaaagatgccaagcgcctgaagaacttc
ttggagttgcgagacaaatacgtacacaagaaagtcctgtttgaagaccctctgttccca
cccaatgattcctctctttggtacagcagcaaatttcccattgaatttgagtggaagcgc
ccaacggaaatctgtgacaacccccagttcatcatagacggagctagtaggacagacatc
tgtcaaggagagctgggtgactgctggctgcttgctgctattgcttgtctgacactgaat
gacaagctgctgtacagagttatcccaccagaccagagtttcacagagaactacgctggt
atcttccatttccagttctggcgttatggcgaatgggtggacgtcgtggtggacgatcgt
atccccacctccaataaccagctggtgttcaccaagtccttcaggaagaacgagttctgg
agcgctctgctggagaaggcttatgccaagttgcacggttcctacgaggccctgaaaggt
ggcaacaccctggaggccatggaggacttcactgggggtgtgacagagttctttgagatg
tccgaggctccaaaagaactctacaagatcatgaagaaagccctggagagaggctctctg
atgggctgttccatagacgccttgctgccgagtcactgcgagactgaaactgcgaatgga
ctggtcagaggccacgcctactctatcactgcactagaggagtgtgacaagcttaaggtt
accaaggataccaagattcgcctagttcaaatgcggaacccctgggggatggtgctatgg
aaagggccgtggaatgcaaagtccaaagaatggtccaccatctccagctcagacaaggcc
aggctgaagaagaagacggttgagacgagcgagacttggatatcctttgaggacttcaaa
aagaacttcaccaagctggaaatctgtaacctgacccctgacacacttctggacgacaag
tcccatagctggacggtggcggtcaacgagggccgctgggtacgaggcagctccgccggg
ggctgcaggaacttcccagacacgttctggaccaacccgcagtaccgcatgcgtctgtac
gaggaggacgatgaccccgacgaccccgagcatgtggcgtgcaccgtcatggtggccctg
atgcagaagggccggaggaaagaccgcagcaagggtgccaagctttacaccatcggattc
tccatctacgaggtgcccaaagagatgattgggagccagcagcacctgcagaaagacttc
ttcctttacaatgcctccaatgccaaatgcaagtcctacatcaacctgcgtgaggtgagc
gagcgattctgcctgccccccggggagtacgtgatcatcccttcaacctttgacccccac
gaggagggagagtttatccttagagtcttctccgagaagaacagcacctcagaggaaacc
gaaaatacaattaggtcagaccacatagagcaaggcaaaaacaggacaaagaaaggaaag
cccatcgtgtttgtatcagacagagcgaaggccaacaaggagattgagcaagatgacatc
gaggttcagaaggagaagaaagagaaagtcaagccaaaaccacagcaaccggatgaggag
agcggagaacacaaaatgttcagggccatttaccagcagattgctggggaggacatgcag
atctgtgccaacgagctcaaggtggtcatgaaaagggtactggaaaaacataatgacatg
aagacggacggcttcagcttagagagttgccggagcatgatcgctttgatggatactgac
ggcacaggaaaactgaacctgcaggagttcaaacacctgtggagtaagatcaaagcgtgg
cagctgatcttcaagaagtatgacaaggacaaatccagcaccatcagcagctttgagatg
aggaatgcagtcaatgacgcagggttccgcttaaacaaccagctgtatgacatcatcacg
atgcgctacgctgacgagcacctcaacatcgactttgacagcttcatctgctgcttcgtc
aggctagaaggcatgttcaggacgttccatgcctttgacaaaaacggagacggcacaatc
aagctcaacgtcctcgagtggctccagttgaccatgtatgcttag
DBGET
integrated database retrieval system
