Salvelinus namaycush (lake trout): 120024273
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Entry
120024273 CDS
T07522
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120024273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120024273
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120024273
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120024273
NCBI-ProteinID:
XP_038824397
UniProt:
A0A8U0PGD6
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Position
Sna29:37399856..37435608
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AA seq
445 aa
AA seq
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MSVFCHEKTHSHAEDELFKKLFIGYNKWSRPVPNISDVVIVKFGLSIAQLIDVDEKNQMM
TTNVWLKQEWNDYKLRWAPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFAVTHMTKAHL
FHNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLERFENTVDLNNY
WESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLFYTINLIIPCLLISCLTVL
VFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVI
TVFVLNVHHRSPGTHKMPRWVHSVFLDLIPRWLFMRRPAPDGRRRRLLMLQQGAAVARHQ
GRTITARPAGPPPFLSTSASCVIRALEGLQYIADHLRAEDADFSVKEDWKYVAMVIDRIF
LWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttttctgtcatgagaagacccactcacatgcggaggacgagctcttcaagaaa
ctcttcatcgggtacaacaagtggtccagacccgtacccaacatctcagacgtggtcatc
gtcaagttcggactctccatagcacagcttattgatgtggacgagaagaatcagatgatg
accaccaacgtctggctgaaacaggagtggaatgactacaagctacgctgggcgccgtct
gactatgacaacgtcacatccatcagagtcccgtcagaactcatctgggtcccagacatc
gtcctctacaacaatgcggacggtgagttcgccgtgacccacatgaccaaggcccatctg
ttccacaatgggaaggtgcgctgggttccccctgccatctataagtcctcctgttctata
gacgttaccttcttccctttcgaccagcagaattgtaagatgaagtttggctcttggacc
tacgacaaggctaaaatagacctggaacgcttcgagaacactgtggacctgaacaactac
tgggagagtggagagtgggccatcatcaacgcagtgggaacatacaacaccaagaagtac
gactgctgtcatgagatctaccctgatatcacctacttcttcatcatcagacggctgcct
ctcttctacaccatcaacctgatcattccctgtctgctcatctcctgtctgacagtcctg
gtcttctatctcccctcagactgtggagagaagatcactctgtgtatctccgtcctcctc
tccctcaccgtcttcctgctcctcatcacagagatcatcccttccacctccctggtcatc
cctctgatcggagagtacctcctcttcaccatgatcttcgtcactctctccatcgtcatc
accgtgtttgtcctcaacgtccaccaccgctccccggggacccataagatgcctcgctgg
gtccactctgtcttcctggacctgatccccaggtggctgttcatgaggcggcctgcgcca
gatggacggagacgcaggttgttgatgctccagcagggggcagcggtggcacggcaccag
ggacggaccatcaccgccagaccagcaggccctcctcccttcctcagcacctcagccagc
tgcgtgatacgtgctctggagggactgcagtatatcgcagaccacctgagggcagaggat
gctgactttagtgtgaaggaagactggaagtacgttgccatggtgatcgaccggatcttc
ctgtggatgtttatcattgtgtgtctcctaggaaccattggactcttcctccctccctgg
ctggctggcatgatatag
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