KEGG   Salvelinus namaycush (lake trout): 120024332
Entry
120024332         CDS       T07522                                 
Name
(RefSeq) collagen alpha-1(X) chain-like
  KO
K19479  collagen type X alpha
Organism
snh  Salvelinus namaycush (lake trout)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 120024332
NCBI-ProteinID: XP_038824480
UniProt: A0A8U0TQG0
LinkDB
Position
Sna29:complement(24466315..24472771)
AA seq 659 aa
MDLRVTSVLLLLVALAVATPERYYHVQKVAKQQYPTKSHVQTVAGEPGIPGSPGEPGPMG
PPGPPGKSGMGHPGPKGPAGTPGPAGYSAAGKAGKPGGPGKPGSNGMPGEKGHTGATGAM
GPRGSPGSPGSPGPAGQSSVGKPGPHGLPGGMGPRGESGLKGHPGIPGLPGQRGEKGVGI
HGAPGANGAVGPMGPSGMPGQPGVGKSGATGYPGEPGKSGTPGRDGAPGAMGMPGPKGHN
GNPGAGSPGKPGENGSPGMSGNMGPKGPQGHAGQPGEPGMPGVGKPGANGMPGDRGSPGT
SGTTGQKGEPGPTGYTGATGATGLTGPAGPQGARGFQGETGIQGLKGDVGMVGAPGAKGT
KGDQGHQGYAGKSGIPGAAGPPGATGATGHQGNKGGQGHTGAPGTPGANGLPGAKGHTGT
PGGPGKPGENGISGGRGPVGPSGPAGQPGLKGHPGLPGTPGPAGQMAKGVSGPMGPPGAP
GSRGHDGNPGAMGPPGQPGPPGEMVYHHEKSMPIKSHEIMMPHEMMKAPMSAFSAVLTRA
YPSAGSPIQFNQIIYNGEQHYDSQTGIFSCQVPGLYYFSYHMHVNGANALVALYKNGEPI
MFSYDEYNKGFLDQLSGSTVLMLNAHDQVYIQVPDEETNGVFAADNVHCSFSGFLIAST
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggacctcagggtgacaagcgttctcctcctcctggtggccttggccgtggcaacacca
gagagatattaccatgtacagaaagtagccaagcagcagtatcctaccaagagccatgtc
caaactgttgcaggggagccaggtattccaggatcccctggtgagccaggacctatgggc
ccccctgggcctcccggcaagagtggcatgggacatcccggaccaaagggcccagccggg
acccccggacctgctggctactctgcagctggcaaggctggcaagccaggtggtccaggg
aaaccaggtagtaatggcatgcctggtgagaagggccatactggcgcaactggcgccatg
ggtccaagaggatctcccggttcccctggaagcccaggacctgctggacaatcttctgtt
ggcaaaccaggcccacacggtctgcccggcggcatggggccaaggggtgagtccggactt
aaaggacatccaggtatccctggtctgccaggacaaaggggagagaagggagttggtatt
catggggcaccaggtgcaaatggtgcagtgggaccaatgggaccatctggtatgccaggt
caacctggagttggtaagtctggtgccactggataccccggggagcctggaaagtcaggt
actccaggtagggatggagctccaggagccatgggtatgccagggccaaagggccacaat
ggaaaccctggggcaggatcaccaggaaagccaggtgagaatggcagtccaggtatgtct
ggaaatatgggacctaaaggtccccagggacatgctggacaaccaggtgaacctggcatg
ccaggagttggtaaaccaggagctaatggcatgccaggagacagaggatcaccaggtaca
tcaggaaccactggtcaaaaaggagagccagggccaacaggttacactggggcaacaggt
gctactgggcttacgggtccagctggtccccagggtgctagaggattccagggagagaca
ggtattcagggacttaaaggtgatgtcggcatggtgggagctcctggggcaaagggaacc
aagggagatcagggacatcaaggttatgcagggaagtcaggtatccccggggcagcagga
cctcctggtgcaacaggtgctacaggacatcagggtaataagggaggtcagggccatact
ggcgctccaggtactccaggtgcaaatgggcttccaggagcaaagggacacacaggcaca
cctggaggacctgggaaaccaggcgagaacggtatctcagggggaagaggaccagtgggg
ccttcaggtccagcaggtcaaccaggtcttaagggtcacccaggtcttcccggtacaccc
ggcccagctggccagatggcgaagggagtttctggtcccatgggtccacctggagctcct
ggttccagaggtcacgatggtaacccaggtgctatgggacctcctggccaacctggtccc
cctggtgagatggtctaccatcatgagaagagcatgcccataaagtcccatgagattatg
atgcctcatgagatgatgaaggcccctatgtctgccttcagcgctgttctgactagggct
tacccttcagcaggatcacctattcagttcaaccagattatttacaatggtgagcagcac
tacgattcccagactggcatcttctcctgccaggtaccaggtctctattatttctcctac
catatgcatgttaatggtgctaatgcattggtggcactgtacaaaaatggtgagccaatc
atgttctcatacgatgagtacaataagggcttcttggatcagttgtctggcagcactgtc
cttatgctgaatgcccatgaccaagtctacattcaggtccctgatgaggagaccaatggt
gtcttcgctgccgacaatgttcactgctctttctctgggttcctgattgcttcaacgtga

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