Salvelinus namaycush (lake trout): 120024493
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Entry
120024493 CDS
T07522
Name
(RefSeq) visinin-like protein 1 isoform X1
KO
K19936
visinin-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120024493
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120024493
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
120024493
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EF-hand domain-containing proteins
Calcium binding proteins
120024493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
Caleosin
Dockerin_1
WEF-hand
IL3
p25-alpha
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
120024493
NCBI-ProteinID:
XP_038824679
UniProt:
A0A8U0TPS0
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All DBs
Position
Sna29:7756633..7797536
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AA seq
191 aa
AA seq
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MGAKNSKLTPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLDEFQQLYVKFFPYGD
ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNNDDQISLDEFKEAAKSDPS
IVLLLQCDLQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgaaaaacagcaagctgaccccggaggtgatggaggatctggtgaagagcacg
gaatttaatgagcacgagctgaaacagtggtacaaaggcttcctgaaagactgccccagt
ggacgactcaatctagacgagttccaacaactctacgtgaagtttttcccctacggagat
gcttcaaagtttgcccagcatgcattcaggacctttgataagaacggggacggcaccatc
gatttcagagagttcatctgtgccctgtctatcacatctcgaggcagcttcgaacagaaa
ctcaattgggccttcaacatgtacgacctggatggagatggcaagatcacacgagtggag
atgctggagatcattgaggccatctacaagatggtggggactgtgatcatgatgaagatg
aatgaggacggcctgacgcccgagcagcgagtggacaagatcttcagcaagatggacaag
aacaacgacgaccagatatcactggacgagttcaaagaggcagcaaagagcgacccttcc
attgtattactcctgcagtgtgacctgcagaaatag
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