Salvelinus namaycush (lake trout): 120024510
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Entry
120024510 CDS
T07522
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4-like
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00562
Inositol phosphate metabolism
snh01100
Metabolic pathways
snh04020
Calcium signaling pathway
snh04070
Phosphatidylinositol signaling system
snh04081
Hormone signaling
snh04082
Neuroactive ligand signaling
snh04261
Adrenergic signaling in cardiomyocytes
snh04270
Vascular smooth muscle contraction
snh04310
Wnt signaling pathway
snh04371
Apelin signaling pathway
snh04540
Gap junction
snh04621
NOD-like receptor signaling pathway
snh04912
GnRH signaling pathway
snh04916
Melanogenesis
Module
snh_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120024510
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120024510
04371 Apelin signaling pathway
120024510
04020 Calcium signaling pathway
120024510
04070 Phosphatidylinositol signaling system
120024510
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120024510
04081 Hormone signaling
120024510
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
120024510
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120024510
09152 Endocrine system
04912 GnRH signaling pathway
120024510
04916 Melanogenesis
120024510
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120024510
04270 Vascular smooth muscle contraction
120024510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120024510
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
120024510
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120024510
Endocytosis
Macropinocytosis
Phospholipase C
120024510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
120024510
NCBI-ProteinID:
XP_038824706
UniProt:
A0A8U0PHR1
LinkDB
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Position
Sna29:5478908..5544361
Genome browser
AA seq
1232 aa
AA seq
DB search
MTKSYEFNWQKHLPGFMQEGASFDRFDEDPFLFEPSCLVKVDEFGFFITWKSDGKEGQVL
ECSLINSIRVGAVPRDPKILSSFEAAGKKEEELEGCVICVCSGTDLVNLSFMYMVADSPD
TARKWTEGLRSVIHNFRANNVCPMTCLKKHWMRMCFLTNVNGKIPVRTITRTFASGKTEK
GIFQALKELGLPSGKNDEIEHSAFPFDIFYALTQKICPRTDIEELFKKINGDKSDFLNVD
QLVSFLNENQRDPRLNEILFPFYDPKRAMQIIEKYERDPDLKKKGRMSSDGFCRYLMSDE
NAPVFLDCLELYQDMEQPLAHYFIASSHNTYLNGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDILFKDVISAIRETAFVTSEYPVILSFENHCSKPQQYKM
ARYCEEIFGEYLLRHPLEGFPVEAGRPLPSPNDLKRKILIKNKRLKPEVEQKQLESFKKH
MEAGETNTPAILLGAETEEDVENALGDVKDVIPDLKTSASEEPSEENSLSTSVSISDSVG
VSVSVNKDGEGKERDNSIKKVVEEDPTEMSEATEATDATDISEASEDNNNKKTGETTDDE
EALIASYTYVGATTNIHPYLSAMVNYAQPVKFQSFDVAEERNIHHNMSSFNESVGLGYLK
TNAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVSLNYQTPDLAMQLNQGKY
EYNGSCGYLLKPDFMRRSDRMFDPFSETPVDGVIAATCSVQVFSGQFLSDKKIGTYVEVD
MYGLPTDTIRKEFRTRMVMNNGLNPAYNEEPFVFRKVILPDLAVLRIAVYDDNNKLIGQR
ILPLEGLQAGYRHISLRNEGNKPLSLPTVFCNIVLKTYVPEGFGAIVDALSDPKKFLSIA
EKRADQMRALGIETSDIADVPNESSKNDKKGKVNTNVKTNVTPQTSSDPAQSSKSAQNNT
TETKKDTNTLVPHVNIDDLKQMKTYLKVIKKQQKDLNSLKKKHAKDRTVMQKSHVTQVDK
MIAQHDKEKQTQEKLLEKAIKKLGENNCLELKKETESKVENLTTDHKAKVKDITAQHTKE
WSEMINSHSSIEQDMKDIHVVQQCENLKKLLSGVQEQQTLSLKLIHERQSKDMRANQAKT
SMENSKAISQDKTIKNKAERERRVRELNSSNTKKFLEERKRLAMKHQKEMETLEKSQKEQ
LEELDKFNEQAKDIQQMVKLEEEMDRRPATVV
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcctatgagtttaattggcagaagcacctgcctggcttcatgcaggaagga
gcttccttcgacaggtttgacgaggacccgtttctgtttgagcccagctgtctggtcaaa
gtggacgagtttggcttcttcatcacgtggaagagcgacggaaaggagggccaggttcta
gaatgttctctgatcaacagtattcgagtcggagccgtgccaagggaccctaagattctg
tcttcgttcgaggcagcggggaagaaagaggaggagctggagggatgtgtcatctgtgtc
tgtagcgggaccgacctcgtcaacctctccttcatgtacatggtggctgacagcccagac
acagctaggaagtggacggagggtttgaggtcagtgatccacaatttcagagccaataac
gtctgtcctatgacctgcctcaagaaacattggatgaggatgtgctttctgaccaatgtg
aacggcaagatcccagtgagaaccatcacacggacatttgcgtctgggaaaacggagaaa
ggaatctttcaggctctgaaggagctgggactgcctagtggaaagaacgatgagatcgaa
cactcagcgttcccctttgacatcttctatgccctgactcagaagatctgccctcgtact
gacatcgaggaactcttcaagaaaatcaatggggacaaaagtgattttttaaacgtagac
cagttagtcagctttctgaatgaaaaccagcgcgacccgcggctaaatgagatcctgttc
cccttctacgacccgaaacgcgccatgcagatcatcgagaagtacgagagagaccccgac
ctcaagaagaaaggccgtatgtccagtgatggcttctgcaggtacctgatgtcagatgag
aatgccccggtgttcctggactgtctggagctgtaccaggacatggagcagccgctggcc
cactacttcattgcctcgtcccacaacacctacctgaacgggaggcagttcggagggaag
tcctccgtggagatgtacagacaggtgctgctctccggctgcaggtgtgtagagctggac
tgctgggatgggaaaggagaagaccaggagcctatcatcactcacggcaaggccatgtgt
actgacatcctcttcaaggatgtgatctcagccatcagggaaactgcctttgtgacgtct
gagtatcccgtgatcctgtcatttgaaaaccactgcagtaaaccccagcagtataagatg
gctcgttattgtgaggagatctttggagaatacctactgaggcatcctcttgagggattc
cctgttgaagcgggtcgtcccttgccttctcccaacgatctcaaacgcaaaatcctcatc
aaaaacaaacgcttgaaacccgaggtggaacagaagcagttagagtcttttaagaagcac
atggaggcaggagagaccaacacaccagccatcttactaggagcagagaccgaggaagat
gtggagaacgctctaggtgatgtgaaggatgtgattcctgacttgaagacgtctgcatca
gaggagcctagtgaagagaacagcctcagcaccagtgtcagtatcagtgacagcgtcggc
gtcagcgtgagtgtgaacaaagacggagaggggaaggagagggacaacagcatcaaaaag
gtggtggaggaggatccaacagagatgtctgaggccacagaagcaacagacgccacagac
atctccgaggcgtctgaggacaacaacaacaagaagacgggagagacgacggatgacgag
gaggctctgattgcctcgtacacgtacgtaggagccaccaccaacatccacccctacctc
tctgccatggtcaactacgcccagcctgtcaagttccagagcttcgacgtcgcagaagag
aggaacatccaccacaacatgtcgtcatttaatgagtcagtgggtctgggctatctgaag
accaacgccatcgagtttgtcaactacaacaagcgtcagatgagtcggatctacccgaaa
ggaggcagggtggactccagtaactacatgcctcagatcttctggaacgcaggctgccag
atggtctcccttaactaccagaccccagatctggccatgcagttgaaccagggaaagtac
gagtacaatggatcctgtgggtatctgttgaagccagacttcatgcgtcgctcagacagg
atgtttgaccccttctcagagacacctgtggacggggtcattgctgctacctgcagtgta
caggtgttctctggtcagttcctgtctgataagaagattgggacctacgtggaggtggac
atgtacgggctgcccacggacaccatccgcaaagagttccgcacgcgcatggtgatgaac
aacggcctgaaccccgcctacaacgaagaaccgttcgtcttccggaaggtgattttacca
gacctggctgtgctgcgcatagctgtgtatgatgacaataataagctgataggtcagagg
attctaccattggagggtctacaggcaggatacagacacatctctctacgcaacgaaggg
aacaagcctctgtctttacccactgtcttctgtaacatagtactcaagacctacgtaccc
gaaggcttcggagccatcgtggacgccctgtcggacccaaagaagttcctgtccatagca
gagaagagagctgaccagatgagagctctggggattgaaacgagtgacatagcggacgtg
ccaaacgagagttcgaagaacgacaagaaagggaaggtgaacaccaacgtgaagaccaac
gtcacgccacagaccagctcggacccggctcagtcctctaagtctgcccagaacaacacc
acggagaccaagaaggatacaaacaccctcgtgccacatgtgaacattgatgacttgaaa
cagatgaagacgtaccttaaagtgattaagaagcagcagaaagatctgaactctttaaag
aagaagcatgccaaggaccgcaccgtcatgcagaagtcccacgtcacccaggtggacaag
atgatcgctcagcacgacaaggagaagcagacacaggagaagctgctggagaaggccatc
aagaaactaggagaaaacaactgtctggagttgaagaaggagactgagagtaaagtggag
aacctgaccacagaccacaaggctaaggtgaaggacatcacagcccaacacactaaggag
tggtcagagatgatcaactcccacagcagtattgagcaggatatgaaggacatccacgtg
gtccagcagtgtgaaaacctcaagaaactactgagtggagtccaggaacaacagactctc
tcgctcaaactgatccacgaacggcagagcaaggatatgcgggccaaccaggccaagacg
tccatggagaacagcaaggccatcagccaggacaagaccatcaagaacaaggccgagagg
gagaggagagttagagagttgaacagcagcaacaccaaaaagttccttgaggagaggaaa
aggttggctatgaagcaccagaaggagatggagacactggagaagtctcagaaagaacag
cttgaggaactggacaagttcaatgagcaggccaaggacatccagcagatggtgaagctg
gaggaggagatggaccgcagaccagccacagtggtttaa
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