Salvelinus namaycush (lake trout): 120024533
Help
Entry
120024533 CDS
T07522
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120024533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120024533
NCBI-ProteinID:
XP_038824736
UniProt:
A0A8U0PHS9
LinkDB
All DBs
Position
Sna29:12636089..12667081
Genome browser
AA seq
625 aa
AA seq
DB search
MAGQTVSMKGPVCLIENDSEGKLCVVRSALETLSQIEQHVVVVAVVGLYRTGKSYLMNKL
AGTNKGFALGATIQSQTKGIWMWCVPHPIKSDHTLVLLDTEGLGDVEKGDDSNDNWIFSL
AVLLSSALVYNSMGTIDNYALEKLHYVTELTDLIKVKSVEGDVDESADYVRFFPSFVWTV
RDFGLDLKLDGKPITAHQYLDNALKLKPGTSKKIVQYNLPRDCLRKFFSPRWCFVFERPA
NSEKMKRMEELTDADLEPSFVMQSRDFCDHIFKEVKTKTMIGGLKVTGKMLGNLTEMYVD
MIRSGQVPCLDNAVVALAQIENSSAIEKAKAYYQQSMAKLVVFPTETQQQLSMVHASMER
EAVAIFMNSSFKDEDQKYQKELMKALQEVYSTICEKNSQESQRACTHIIEHIFAPLKVQL
TNGSYMTPGGYKHYCDDLKMMTSEYRSTGGKGVKAEEVLKKYLNDKESTGQAILSADQSL
TEAELRAEEEKAKREASEQEKRTMEEQIKVQELLMDDQKRTYEEHKKQLLEKMEADKENA
KVEYNRVLEAKLKEKEDLLKEGFHCKAQEMEAQIKDLRMEQEEQEKAKPSIWKQALDNIG
TAALMIPGWGKLIGVGMKVGSHFMK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccaaacagtgtccatgaaggggccagtgtgtctaattgagaacgacagtgaa
gggaaactgtgtgtggtccgcagcgcactggaaaccctgagccagattgagcagcatgtg
gtagtggtggcagtggtcggcctgtaccgcaccggcaagtcatacctcatgaacaaactg
gctgggacgaacaaaggttttgcccttggagccacaattcagtcccagactaagggcatc
tggatgtggtgtgtgccccacccaataaaatcagaccacaccttggtgctgctggataca
gaggggctgggggatgtggagaagggtgatgatagtaatgacaactggatcttttccctg
gctgttcttctgagcagcgccctggtgtacaacagcatgggcaccatcgacaactacgcc
ctggagaaactgcactatgtgacagaactgacagacctcattaaggtgaagtcggttgag
ggagacgttgatgaatctgcagactatgtccgtttctttccgtcttttgtgtggacggtc
agagatttcggactagatttaaagctcgatggaaaacccatcacagcacatcagtacctg
gataatgctcttaaactgaaaccaggtactagcaagaagattgttcaatacaacctgcct
cgtgattgtctgcggaaattcttttccccccgctggtgttttgtctttgaacgacctgcc
aactctgagaaaatgaaacgcatggaggagttgacagatgctgacttggaaccctccttt
gtgatgcagtccagagacttctgtgaccacatatttaaagaagtcaagactaagaccatg
ataggtggcctgaaagtcactggtaaaatgctcgggaacctgacagagatgtacgttgac
atgatacggagtgggcaggtaccctgcctggacaatgctgtggtggcgctggcccagatt
gagaactccagtgccattgaaaaggccaaggcctactaccagcagagcatggcaaagctg
gtggtctttcccactgagacccagcagcagctgtctatggttcatgcttccatggagagg
gaggcagtggccatcttcatgaatagttcattcaaggatgaagaccagaagtaccagaag
gagctcatgaaagcgcttcaagaagtatattcgacaatctgtgagaaaaactcgcaggaa
tcccagagggcatgcacgcacatcatcgaacacatatttgctcccctaaaggtccaactt
acgaatggttcctacatgacccctggaggatacaaacactactgcgatgacctcaaaatg
atgaccagcgaatacagatcaacaggaggcaaaggagtgaaggctgaagaggtactgaag
aagtacctgaatgacaaggaaagcactggtcaggccatcctgtcagcagaccaatctctc
actgaagctgagttgagggccgaagaggagaaagcgaaaagggaggcgtctgagcaagag
aaacgaaccatggaagagcagatcaaagtccaggaattgctgatggacgatcagaagaga
acgtatgaagagcataagaaacagctgttggagaagatggaggctgacaaggaaaatgct
aaagtagagtacaatagagttctggaggccaaactcaaggagaaggaagacctcctcaag
gaagggtttcattgcaaagcacaagaaatggaggcacagattaaggacctcaggatggag
caggaggaacaggaaaaagctaagccctcaatatggaagcaagctctggataacattgga
actgctgctctaatgattccaggatggggaaaattaattggagttggtatgaaagttggg
tcacatttcatgaaatga
DBGET
integrated database retrieval system
