Salvelinus namaycush (lake trout): 120024588
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Entry
120024588 CDS
T07522
Name
(RefSeq) poly(A) polymerase type 3-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120024588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120024588
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
120024588
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
120024588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF6431
Motif
Other DBs
NCBI-GeneID:
120024588
NCBI-ProteinID:
XP_038824803
UniProt:
A0A8U0PGP4
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Position
29:complement(34071105..34086700)
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AA seq
715 aa
AA seq
DB search
MPFPSTNQVLLGRETPKHYGITSPISLAQAKEADLVLTHRLTEALKPYGVFEEELELQRR
IHVLGKLNTLVKEWIRDVSETKNLPASVIETVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFLDKLKEQEEVKDLRAVEEAFVPVIKLSFDSIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAVMVDEFKQGLSITDEILQSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKESRDKEEVSTMWVIGVIFKKMEASENLNVDLTIDIQSFTDTVYRQAMNSKMFEADM
KIQAMHVKRRQLHQLLPNLVMPKRRKHSTEGLRQMNDSSLDLSLDSDNSMSVPSPTAVPA
TVPTSTPVKCGPLGPPPSPIAAAASQPEAPAVKRPGSPTQEDRKRFKSDAEDSAIEKKPS
GDPVPTSLTPSPPPTMGPPAAPQTSRQEMLEEEDPSPVPETRTTEDGAPAGEECTTVETQ
VNEDRMSEEMPASEGEGKMEADIKRMVSADLSDVPLLPANPIPVVKNSIKLRLSR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccctttccgtctacaaaccaggtgttgttgggtcgggagacacccaaacactatggg
atcacttctcctatcagcctggcccaagccaaggaggctgacctggtcctcacacacagg
ctgactgaggccctgaaaccatacggggtgtttgaagaggagctggaactacagcgcaga
atacatgtgttgggaaaactgaacaccctggtgaaggaatggatccgtgacgtcagtgag
acaaagaatctgcctgcctcagtgattgaaacggttggagggaagatcttcacatttggg
tcctacaggttaggagtccacactaaaggtgctgacattgatgccctgtgtgtggctcct
cggcatgtggagagaacggacttcttctcctcgttcctggacaagctgaaggagcaggag
gaggtcaaagatttgagggctgttgaggaggcatttgtccccgtgataaagctgtctttc
gacagcattgagattgatatcctgtttgcccggttagcgttgcaaaccatcccagagaat
ctggacctccgagatgacgggttgctgaagaaccttgacatccgctgcataaggagtctt
aatggttgtagagttacagatgaaatcctccatcttgtgcccaacattgagaacttcaga
ctgacactgaggaccatcaagctgtgggctaaacgtcataacatctacagtaacatcctg
ggcttcctgggtggtgtatcctgggccatgctggtagccaggacctgccagctctacccc
aacgctgtggcctccacccttgtacacaagttcttcctcgtcttctccaaatgggaatgg
cccaaccctgttctcctgaagcagccagaggactgcaacctgaacctgccagtctgggac
cccagggtgacccccagtgaccggtatcacctgatgcccatcatcacaccagcctacccc
cagcagaactccacctacaacgtctctgcctctacacgtgccgtcatggtggacgagttc
aaacagggtctgtccatcacagatgaaattttgcagagtaaagcagagtggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatattgtgttgctagcgagcgcc
cccaccgagaagcagcacctggagtgggttggtctggttgagtctaagatcaggatctta
gtaggaaacctggagaagaatgagttcataacgttggcccatgtcaacccccagtccttc
cccggacccaaggaaagcagggacaaagaggaggtcagcaccatgtgggtgataggggtt
atctttaagaagatggaggcatcagagaacctcaacgttgacctgaccattgacatccag
tcctttactgacacagtgtaccggcaggcgatgaacagcaagatgtttgaggcggacatg
aagatccaggccatgcatgtgaagaggagacaacttcaccagctactgcccaacctggtc
atgcccaaacgcaggaagcactcgacagaggggcttcgtcagatgaatgacagtagtctg
gacctatcgttggacagcgacaacagtatgtcagtgccgtcccccacggccgtgccagcc
actgtgcccacgtcaaccccagtgaagtgtggcccactaggtccccctccaagtcccatc
gcggctgcagccagccagcctgaggccccggctgtgaagagacctggctcccctacgcag
gaagacaggaagaggttcaaatcagatgctgaggattcagccattgagaagaagccttca
ggagacccagtccccacaagcctgaccccctctcctccgcccaccatgggccccccagcg
gccccccagacctctcgccaggagatgctggaggaggaggacccctccccagtaccagag
actaggacaacagaggatggtgcacctgctggagaggagtgcaccactgtggagacacag
gtcaatgaggacaggatgtctgaggagatgcctgcttctgaaggggaaggcaagatggag
gcagatattaagcgaatggtcagtgcggacctgtctgatgtgcccctcctgccagccaac
ccaattccagtggtcaagaactctataaagcttcgcctcagcaggtag
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