Salvelinus namaycush (lake trout): 120024593
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Entry
120024593 CDS
T07522
Name
(RefSeq) GDNF-inducible zinc finger protein 1-like
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120024593
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120024593
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GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_16
zf-C2H2_6
zf-C2H2_PRDM15
C2CH-3rd_BIRD-IDD
zf-C2H2_8
zf-met
DUF7128
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
120024593
NCBI-ProteinID:
XP_038824811
UniProt:
A0A8U0PHX3
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Position
Sna29:4994451..5001408
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AA seq
874 aa
AA seq
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MSDQVVQLSSAFHHEDMLQSLHQLRLHGHLCDVTVQVDFQGELEEFEAHQAVLAASSGYF
KNILLAPDPPKKLFLGNVRTTDFTRFLEYVYTGKLEVDKEFAKDKIGVIHEVATLLECKS
LVQACSSVLDEGSLSLHRVEASMSQDMEADLDDVGEEDVALGVGVNKVPKIASTKRLIPP
TKPERGEKRAKVAVTAEEERSEVNKDTEVSGRRSNRLAGRRVFIDIPKKKYVRKMKDQTK
AQMEDLPDNNTQTTNQGENTDDTQEAEEALPEPLPEKEGAGLESTDVDDEDEVEEGDIPG
DCPDDSLFLPSKEEEGEEEGEERATNRSSRRIDTQYKCDKCQRTFHYEKSYLKHIKTSHS
VQGEVTYRCDTCQQTFANRCNLKIHQRHVHSDERLFPCDVCTKTFKRKKDVTRHRRQVHE
GGGERHTCLVCNKALSSKTALTLHERTHTGDKPYSCTDCEAKFSQSSALKTHRRTHTGEK
PFACDQCDARFTQNHMLSYHKRAHTGEKPFMCESCGKSFASKEYLKHHSRIHTGSRPYKC
EQCGRAFAQRNSLHQHMKIHTGERPYHCTDCDKQFTQLNALQRHQRIHTGEKPYMCGLCN
RTFTDKSTVRRHTMTHDQNTPWKNYLVVLKDNMEKKTKKPRSLGRKVKIETVVREVEGDS
GAGGRLQEGTILVPGEPITLSASWGDPGTIALVSHTTLGGFTVIQTEMPAGTQLPIVTTD
GTGASVISLDGSTVSVPFTIPVSMSSISVSSSSSGVLPVQTVSVSVPVTVSGAIFAPVSE
TSLSTSCVLETAVSQTILAPDLEAGPGSDMTTIADPEEAVSECAPISEECVTVQTSELET
ETQSTAVSNEEQHSVPEDIGTVEDLEVSTEDTVV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagtggtccagctctcctcagcctttcaccatgaggacatgcttcagtct
ctgcaccagctcagactgcatggccacctgtgtgatgtcacagtccaggtggacttccag
ggtgagctggaagagtttgaggctcaccaggcggtcctagctgcctccagcggctacttc
aagaacatcctactggccccggacccacccaagaaactattcttggggaacgttcgaacc
actgatttcaccaggttcttggaatatgtatacactggcaaactggaggtggataaagag
tttgctaaagacaagattggtgtaatacatgaagtggcgacactgttggagtgtaagagc
cttgtccaggcttgcagctcggttctcgatgaaggcagcttgagtctgcacagggttgaa
gcgtccatgtcacaggacatggaagctgatttggatgatgtgggagaggaggatgtggcg
ctgggggtcggagtcaacaaagttcccaaaatagcctccaccaagaggctgattcctcca
acaaaaccggagagaggggagaaaagggcaaaggtcgcggtcacagccgaggaggagagg
tcagaggtgaataaagacactgaggtctctgggaggaggagtaacaggctggcagggcgc
agagtcttcattgacattcctaagaagaagtacgtgaggaagatgaaggaccagaccaag
gcgcagatggaagatctgcctgacaacaacactcagacaaccaatcagggggagaacact
gacgacacacaggaggcagaagaggcccttccagagccgctgcctgaaaaagagggggcg
ggactggagtcaacagacgttgatgatgaagatgaggtggaagagggagatataccgggg
gattgtccagatgactccctcttcttgcccagcaaggaagaggagggtgaggaggaggga
gaggagcgtgccaccaacagatcatccagacgtattgacactcaatacaagtgtgacaaa
tgtcaacggaccttccactatgagaagagctacctgaagcacatcaagacgagccacagt
gtgcagggggaggtgacgtaccgttgtgacacctgccagcagaccttcgccaaccgctgc
aacctgaagatccaccagagacacgtccacagtgacgaaagactgttcccctgtgacgtc
tgcaccaagaccttcaagcgcaagaaggacgtgacgcgccaccggcgacaggtgcacgag
ggaggcggtgagcggcacacctgtcttgtgtgtaacaaggctttgagctctaagacagcg
ttgacgctacacgagagaacacacacaggagacaagccctactcctgcactgactgtgaa
gccaagttctcccagagctcagccctcaagacccaccgcaggactcacacaggagagaag
cctttcgcctgtgaccagtgtgatgcgaggttcacccagaaccacatgttgtcctatcac
aaaagggcccacacaggagagaagccttttatgtgtgagagctgtgggaaaagctttgcc
tctaaagaatacctgaaacaccactctagaatccacacaggctccaggccttacaagtgt
gaacaatgtggtcgggccttcgcccagagaaactccctccaccagcatatgaagatacac
acaggtgagcgtccgtaccactgtacagattgtgataagcagttcacccagctgaatgcc
ctccagaggcaccagaggattcatacaggggagaagccctacatgtgtggcctctgcaac
cgtaccttcacggacaagtccactgtacgcagacacaccatgactcacgaccaaaacact
ccgtggaagaactacctggtggtcctcaaggacaacatggagaaaaagacgaagaaaccc
agaagccttggtagaaaggttaaaatagagacggtggttcgggaggtggaaggggatagt
ggagctggaggtaggctccaggaggggaccatattggttcctggtgagcccatcaccctc
tcagccagctggggcgacccagggaccatcgccctggttagccacaccaccctgggtggg
ttcacggtcatccagacagagatgccggctgggacccagctacccatcgtcaccacagat
ggcaccggggccagtgtcatctctctggatggatccactgtctctgtcccctttactatc
cctgtctctatgtcctccatctctgtgtcctcgtcctcctctggtgtcctccctgtccag
actgtgtctgtctctgtcccagtcactgtttcaggggccatatttgccccagtttcagag
accagtctttcaacttcgtgtgttctggaaactgcggtgtcgcagaccatcttggctcca
gatttggaagctgggcctggttcagatatgacgaccattgcggatcctgaggaggcagtt
tcagagtgtgccccgatctctgaggagtgtgttacagtgcagacatcagaactggagact
gagacacagagcactgctgtctctaatgaggaacaacacagtgtaccagaggacattggt
actgtggaagacctggaggtgtccaccgaagatactgtggtgtag
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