Salvelinus namaycush (lake trout): 120024692
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Entry
120024692 CDS
T07522
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase-like
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00860
Porphyrin metabolism
snh00970
Aminoacyl-tRNA biosynthesis
snh01100
Metabolic pathways
snh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
120024692
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120024692
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120024692
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120024692
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
120024692
6.1.1.17 glutamate---tRNA ligase
120024692
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class I (A)
120024692
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120024692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
WHEP-TRS
tRNA-synt_2b
HGTP_anticodon
ProRS-C_1
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C
GST_C_2
GST_C_3
Motif
Other DBs
NCBI-GeneID:
120024692
NCBI-ProteinID:
XP_038824862
UniProt:
A0A8U0PH96
LinkDB
All DBs
Position
Sna30:complement(34441458..34494420)
Genome browser
AA seq
1503 aa
AA seq
DB search
MALNLTINSSNPPLGALLAAEHVKGSVNLSVDEGKDNKLRVSESVQFSDVNSITRYLARV
TPTLSLYGSNMLEQTEVDHWLEFSTRRVCGQSGLATALEELDKALALRTFLVGHSLTLAD
LCVWAALKGSNEWQSIQKQAGAFSHVARWFSFLGSQVPFTAVGNKYANSKAPPHKSDEKK
QDLGKFVELPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDDTNP
EKEKEDFEKVILEDVAMLQIKPDQFTYTSDHFPRIQGMAEQLLREGKAYIDDTPPEQMRA
AREQRTESHHRSNSVEQNLKMWEEMKAGTEYGQTCCMRAKIDMASNNGCMRDPTLYRCKN
APHPRTGSTYRVYPTYDFACPIVDSVEGVTHALRTTEYHDRDDQFYWVIEALGLRKPYVW
EYARLNLNNTVLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGGS
RSVVNMEWDKIWAFNKKVIDPVAPRYTALSGSYSVPVVIPEATEEMKEAVKHPKNTEVGM
KAVWYGPRVLVEGADAETFTKGEIVTFINWGNIIITQIHKDASGKVTSLDGKLNLENKDY
KKTTKITWLAETPRAPLLPTVCVNYQHLITKPVIGKEDDFKEYINKQSKLEEKMLGDPCL
KDLKKGDIIQLQRRGFYICDQPYEPISPHSCKESPCVLLFIPDGHTKEMPTAGSKEKCKA
TTTTAPFPATCQGAPVSAPASDACAVFFGIVAQGEKVRDLKTAKAPKEKVDKVVKELLSL
KAQFKQLTGQDYKPGMAPPASSTTQKAATPAPSADSTSCPFACITQQEELKSEKASKDQM
DAAVKHLLSLKAEYKQVTGQDYKPGMAPATSPAPVQASPAPEAQSSSSVKVLFSQVSHQG
ELVRKLKSEKAPKDQLDGAVKQLLGLKTQYKALTGEEYKPVASAGASGGEDKNRKDRENK
SEKQGGGSGGGGGKKQPKGDKVKEVSSGGAGGGGGEGGPKKQTRLGLEAKKEENLSDWYS
QVITKAEMIEYYDVSGCYVLRPWSYSIWESIKEFFDREIKKLGVENCYFPMFVSQAALEK
EKSHIADFAPEVAWVTRSGNTELAEPVAIRPTSETVMYPAYSKWVQSHRDLPIKLNQWCN
VVRWEFKHPQPFLRTREFLWQEGHTAFATKAEATEEVLQILDLYARVYEELMAIPVVKGR
KTEKEKFAGGDYTTTVEAFISASGRAIQGATSHHLGQNFSRMFEIVFEDPKKPGEKQLAY
QNSWGITTRTIGVLTMVHGDNMGLVLPPKVACLQVIVIPCGITASLPEAEKEVLLAQCSK
YLARLQRGEIRVKADLRENYSPGWKFNHWELKGVPIRLEVGPKDLKQGQCVAVRRDTGEK
ITLPEADTEKRLTQLLEDIQTNLFKRASDDLNKHMVVADSMEQFQKDLDQGRIVQIPFCG
GIECEDWIKKTTAKDQDLEPGAPSMGAKSLCIPFKPLQPLQPGQMCVSGKEAAQYYTLFG
RSY
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaaccttaccatcaacagtagcaaccctcctttaggggcgctgttggcagct
gagcatgtgaagggcagcgtgaacctgtctgtggatgagggcaaagacaacaagctccgt
gtctcagagtcagtgcagttcagcgacgtgaactccatcactcgctaccttgcccgtgtg
actcccactctgagcttgtacggctccaacatgctggaacaaactgaggtggaccactgg
ctggagttcagtacgcggcgcgtgtgtggacagtcgggcctagctacagccctggaggag
ctggacaaggccttggctctgcgcacattcctggtgggccacagcctgactctggccgac
ctctgtgtgtgggctgcgctcaaaggtagcaacgagtggcagtcaatccagaagcaggcg
ggggcattctctcacgtggctcgctggttttcctttctaggctcccaagtgccctttact
gcagtgggcaacaagtatgccaacagcaaggcccctcctcacaagtccgatgaaaagaag
caggacttgggcaagtttgttgaattgccgggagccgagatgggaaaagtggtggttcgc
ttcccccctgaggccagcgggtatctgcacattggccacgccaaggctgccctgctcaac
cagcactaccaggtgacattcaagggcaagctcatcatgcgcttcgacgacaccaaccca
gagaaggagaaggaggactttgagaaggtgatcctggaggacgtggccatgctgcagatc
aagcctgaccagttcacctacaccagcgaccacttccctcgcatccagggcatggcggag
cagctgctgagggagggcaaggcctacatcgacgacacgcccccagagcagatgagggcg
gcaagggaacagcgcaccgagtcccaccaccgcagcaactcggtggagcagaacctgaag
atgtgggaggagatgaaggcgggcacggagtacggccagacgtgctgcatgcgggccaag
attgacatggcctccaacaacggctgcatgcgcgaccccaccctctaccgctgtaagaat
gccccccacccccgcactggcagcacctacagggtgtaccccacgtacgactttgcctgc
cccatcgttgacagtgtggagggcgtgactcatgcgctgcgcacaacagagtaccacgat
cgcgacgaccagttctactgggtgatcgaggcgttaggtctgcgcaagccctacgtctgg
gagtacgcccggctcaacctcaacaacactgtgctctccaagcgcaagctcacctggttc
gtagaccagggctatgtcgatggctgggacgaccctcgcttcccaactgtcagaggtgtc
ctgcgcagaggaatgaccgtcgagggcctcaagcagttcatcgctgcccagggtggatcc
aggtctgtggtcaacatggaatgggacaagatctgggccttcaacaagaaggttatcgac
ccagtggcccccagatacacggccctgtcaggatcctactcagtccctgtcgtcatccct
gaggcaacagaggagatgaaggaggccgtcaaacaccccaagaacacagaggtggggatg
aaagcggtgtggtacggacccagggtgctggtggagggggcagatgcagagaccttcaca
aagggagagatagtcaccttcatcaactggggaaacattatcatcacccagatccacaaa
gatgccagcggtaaggtcacctccctggacggcaaactgaacctggagaacaaggactac
aagaagaccaccaagatcacgtggctggccgagaccccccgcgcgcccctgctgcccacc
gtctgcgtcaactaccagcacctcatcaccaagcctgtcataggcaaggaggacgacttc
aaggagtacatcaacaaacagagcaagctggaggaaaagatgctgggagacccctgtctg
aaggacctgaagaagggtgacatcatccagctgcagaggcggggcttctacatctgtgac
cagccctacgagccaatcagtccccacagctgcaaggagagtccctgtgtgctgctgttc
atccccgatggccacaccaaggagatgcccaccgccggctccaaggagaagtgcaaggcc
accaccaccacagctcccttcccagccacgtgccaaggcgctcccgtctctgccccagct
agcgatgcctgcgccgttttctttggcatcgtggctcaaggtgagaaggtacgcgatcta
aaaaccgccaaggcccccaaggagaaggtggacaaagtggtaaaggagctactgtcactc
aaagcccagttcaagcagctgactggccaggactacaaaccaggcatggccccacccgcc
agctccaccactcagaaggccgcaacccccgcaccttctgctgactccacctcctgcccc
tttgcttgcatcacccagcaggaggagctgaagtccgagaaggcctccaaggaccagatg
gacgcagccgtcaagcatctgctgtcactcaaagcagagtacaagcaggtgactggccag
gactacaaaccaggcatggccccagccaccagccctgcccctgtccaggctagccccgcc
cccgaggcccagtctagctcctccgttaaggtgctcttctcccaggtgtcccatcagggg
gagttagtgaggaagctgaaatcggagaaggctccgaaggaccagctggatggtgccgtg
aagcagcttctgggcctgaagacccagtataaggccctcacaggagaggagtataaacct
gtggcttccgccggagcctcaggcggagaggacaagaaccgcaaagaccgagagaacaag
tctgagaaacagggaggtggtagtggcggaggaggagggaagaagcagcccaagggagac
aaagtcaaggaggtctcgtcgggaggcgcagggggaggaggaggagaggggggtcccaag
aaacagacacgactgggactggaggctaagaaggaggagaacctgtctgattggtactct
caggtaatcactaaggcggaaatgattgagtactacgatgtgagcggctgctatgtactg
cggccctggtcatactccatctgggagtccatcaaggagttctttgaccgcgagatcaag
aagctgggcgtggagaactgctacttccccatgtttgtctcacaggctgccctggagaag
gagaagtcccacatcgcggattttgcccccgaggtcgcctgggtgacgcgttcagggaac
actgagcttgccgagcccgtcgctatccgacccactagtgaaactgtgatgtaccctgcc
tactccaaatgggtccagtcccacagagacctccccatcaaactcaaccagtggtgcaac
gttgtgaggtgggagttcaagcacccccaacccttcctgaggaccagagagttcctgtgg
caggagggacacacggctttcgccaccaaagcggaggccaccgaagaggtgttacagatc
ctggacctgtatgcgcgggtgtacgaggagctcatggccatccctgtggtaaagggcagg
aagactgagaaagagaagtttgccggaggtgactacactaccaccgtggaggccttcatc
tctgccagtggcagagccattcagggcgccacgtcccatcacctgggacagaacttctcg
cggatgtttgagattgtgtttgaggaccccaagaagccaggtgaaaagcagctggcatat
cagaactcgtggggtatcaccacccgcaccatcggcgtgctcaccatggtccacggtgac
aatatgggcctggtgctgccccccaaagtcgcatgtctccaggtgatcgtcatcccatgt
ggtatcacggcctccctgcccgaggctgagaaagaggttctcttggcccagtgctccaag
tacctggctcggctgcagaggggagagatccgagtcaaggcagacctccgagaaaactac
tcccctggctggaagtttaaccactgggagctcaagggtgtgcccattcgtctggaagtg
ggtcctaaggacctgaagcagggtcagtgtgtggccgtgaggagagacacaggggagaag
atcaccctgcccgaggccgacacagagaagaggctcacacagctactggaggacatccag
accaacctcttcaagagggcatcagatgacttgaacaagcacatggtggtagcagactct
atggaacagttccagaaagatctagaccagggcaggattgtccagatccccttctgtgga
ggaattgagtgtgaagactggatcaagaagaccactgccaaggaccaggatctggagccc
ggtgccccctctatgggtgcaaagagcctgtgtatccccttcaagcccctgcagcccctg
cagccgggccagatgtgtgtcagcggcaaggaggccgcccagtactacactctgtttggc
cgtagctactaa
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