Salvelinus namaycush (lake trout): 120024734
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Entry
120024734 CDS
T07522
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120024734
03036 Chromosome and associated proteins [BR:
snh03036
]
120024734
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120024734
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
120024734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
120024734
NCBI-ProteinID:
XP_038824941
UniProt:
A0A8U0TRA8
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Position
Sna30:10528725..10563518
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AA seq
702 aa
AA seq
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MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMQKSKTMNGNSVPQQQIHTVENYMT
GNKVYTAAPVRPVNGNRAVPVDYCTPQRDIVYPNEDSYCTKSEIALPCYSGASERHRRYS
LEVLGHRYSTGSAYDGVVLNKPVPSPGNRCNSICVTTNHDGRYNATSPRSSFVSSLSSQE
QSKHASPRSSISSPRTSLVVPGQDKYTSPRSSLVHCEGSSALSPRSSYASTASDTSKHSS
PRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTTSPRSSYSDSRYMPVE
NHDLEGAVLHGMPVASPRSSLCSQDGCARPGTIANCVVSPRSSISSHSSRSSRSSRGSMS
TYPDLQLPSPRSSMLGTGLQEDILTQDCGDTNGVHSRIHLQALSGMPEALTQHAPQQSTQ
AGMNTEVTAGSPSSSYGLHTKTPASGQRFKLPYQVTPCRESGPSQAERSLEALTLELEKE
LEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVHGKV
YCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCVVCTEGLDGVPFTVDV
ENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLND
EEGHRCYPLDCHLLCHGCHIRRLMVPVPGHQPPSYPLHVTEL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatggaatgtacagttcaaggagggacatgcagaaaagtaag
acaatgaatggcaactctgtgcctcagcaacagatacacaccgttgagaattacatgact
gggaataaagtgtacactgcggctcccgtgcgccccgtgaatggcaacagagccgttcct
gtggattattgcacccctcaaagagacatagtttatcctaacgaagatagctattgcacc
aaatccgaaattgctttgccgtgttatagcggcgcgtccgagcgacacaggaggtactca
ttggaggtgctggggcataggtacagcactggtagcgcgtacgatggagtggttttgaac
aagccagtaccttcacctggcaacagatgcaacagtatctgtgttaccaccaaccacgac
ggcagatacaatgcaaccagcccgcggtccagtttcgtatcctccctctcctcccaggag
caaagcaaacatgcaagcccgaggtcgagcatcagtagcccgcgcacgagtctggtggta
cccgggcaagacaagtacactagtcccaggtccagtctggtacactgtgaagggagcagt
gccctcagcccccggtctagctatgcaagtacagccagcgacacaagtaaacattccagc
ccaagggccagtctgaacagctatgactgctgcagtaagcccagcagtaaccgcaccagc
ggcatcagtatgggctacgaccaaaggcacatcagccccaggtccagcacagcgagccag
tattcttgtaccaccagtccacgctctagctattcagattcgcgttacatgcctgtggag
aaccatgatttggagggtgccgttttgcatggcatgccggtggccagtccccggtcaagc
ctctgcagccaggacgggtgcgcaagacccgggacaatagctaactgcgtcgttagtccc
cggtccagtatctccagtcacagttccagaagttcccggagctccaggggatctatgagc
acatacccagatctccaactgccttcacccaggtcctcaatgctggggactggtttgcag
gaggacatactaacacaagattgtggcgataccaacggtgttcatagtcgtatccatctc
caagcgctctctgggatgccagaggccctgacacagcatgcaccacaacagtcaacccag
gcagggatgaatacagaggtgaccgctggatcaccatcatcttcttatgggctccatacg
aaaactccagcctcagggcagaggtttaaactaccttaccaggtgaccccatgccgggaa
agtggcccaagccaagcagaaaggagtctggaagcactcaccttggagctggagaaggag
ttagaaatgcacatgaaaaaagaatactttggtatctgtatcaagtgtgggaagggtgtg
tatggagccagccaagcctgtcaggccatggggaatctgtaccataccaactgcttcacc
tgttgctcctgtgggaggaggctgagagggaaagctttctacaacgtccacggcaaggtc
tactgtgaagaggacttcctgtactctggctttcagcagacggcagagaagtgctttgta
tgtggtcacctcatcatggaaatgatcctgcaggcactgggcaagtcctaccaccctggc
tgcttccgctgtgtggtctgcacagagggtctggacggagtgcctttcactgtggacgtg
gagaacaacatctactgtgttaaagactaccacacggtctttgccccaaaatgtgcctca
tgcaaccagcccatcctccctgctcagggctctgaggagaccatccgggtggtatccatg
gacaaggactaccatgtggagtgctatcactgcgaggactgtggcctccagctaaacgac
gaggagggtcaccgctgttaccccctggattgccatctgctctgtcacggctgccacatc
cgcaggctcatggtcccggtgcccggccaccagccacccagctacccactacacgtcact
gagctgtga
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