Salvelinus namaycush (lake trout): 120024767
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Entry
120024767 CDS
T07522
Name
(RefSeq) ADAMTS-like protein 3
KO
K24429
ADAMTS-like protein 1/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120024767
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
120024767
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
I-set
Ig_3
TSP_1
ig
Ig_2
PLAC
V-set
TSP1_CCN
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
120024767
NCBI-ProteinID:
XP_038824980
UniProt:
A0A8U0PHS7
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All DBs
Position
Sna30:complement(2813752..2919018)
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AA seq
1625 aa
AA seq
DB search
MSWAFHRSSTQLEVGCDRQLGSGATEDNCGVCAGDSSTCRLVRGQALPHVSPEEPVKTVL
EVPLGSRSLRVSSKGPDVIVIETQSLQGRREEHSLVSPGSYLIGNTTVDYQKGTDRQTLR
TQGPLGADYIIKVKYAAPRDTMVQFLFYQPIRYQWRETDFFPCSVTCGGGYQLNSAECTD
IRSSQVFPEHHCNSYPENTKPTPKLKECNMDLCPESDGFIEVMPYDHFQPLPRWEQGPWT
ECSVSCGESGGLQERSVVCVEDDAHGQITQVEEWKCTHSPRPITQQSCNSFTCPQWVAME
WSQCTVTCGRGLRYRVVLCIDHRGQHTGGCNTSLKPHIKEDCLVPVACHKPRESVPVEAK
LPWLKQAQELEEQRTATEEPTLIPGPWSPCSVTCGLGKQTRGLKCRVLLSFTQTEVDLPE
EECGEERPQLERPCDGGACTLGPGFSPDLQDLQGPHTQGEEPHHWDYRGFSGCSASCATG
RQTAVVRCVSRERGGEEVDDPLCDPSSRPPVMGRICNPEPCPPRWEVTAWTRCSASCGVG
IQTRSVFCMRVLSVEQQDSVSVSENECREFKPSILQPCNQVDCPPAWETEPWQECSLSCG
GGSQVRKVFCKQLLSTGAYWTLGDTACPGAKPAPHRTCSKTDCLPYMAGGEWGKCSVSCG
LGIQRREPVCRRLTSAGQEVMLARRLCNGLSSPPLVRTCRMITCPKHKTEMNPRQLVKEA
SIINQQPTKETGKEASKKTIKEPVKRCPLILGLSRIYIQTRQEKRLHLTIGGRAYLLPKT
SLVIKCPVRRFQKSYIRWEKDGRPLPSCKRLGVTKSGSLKIHSLGVVDSGVYVCIAGPAS
DTFTLKLIGSDSRLIDRPVENESDPEPGLDLTRIQPRFNPQDWDPQGLPHCLPFTPSLKG
PSLSLLPGGVEASVLQVQAGASVQQPWSLEERVRNVSLQAEMGEISQEQASQIIYTLITE
MSGVQQASTEQWKGTKEETGNPKDRTPNSSEWSASSFRRPVIIRQRQNPLMTFQRSLNIS
VGQTAFLTNATRQLYLLCPTEGIPQPQITWTKDGVELQLTDRVHWDISGGLHISSPGSGD
RGVYRCTASNTHGSASETTQLLLAEPPVIAMSWRNVSDKEVPSLRAVVGGRVSLRPGANL
TLDCPVTGVPQPTVTWQRKEGVLDVSVAVPLPSGSLWLQNVTLQSQGTYSCVAANPIGKS
TASTVLHVTGPAPDPAPGRGSTMSQQFKELSRRRVLMASRMGTTVTIRPGDILRIGCPVV
PDHRGPIRWDYQNHTLKESTWTGPDLAPGKRLGPGQDQGLGLGLQYRILMGGRVLEVNTV
QGRFSGHYRCQTPIHNNTQLLSAWIHVHAEEFAWRLGDWTACSASCGDRGTRTRRVRCVT
PEGCEVTPSMCHHLDRPVSSQLACNLHDCPPSWVASVWSKCSTSCGRGWRQRQVSCGQVE
SGGAVRTLASSVCGGNTRPADRQECTCDNCPAWVTSPWGKCSGKCLGPTLTVQKRSVICR
HVNGTTHPDCDPRERPVSVRNCSSELCDVHWRVGPWRACTAACGSGFQSRRVDCAHRRSG
RTLADQHCTWHRRPATWQHCNATTCGSECKDTTHYCAVVKRLKLCPIDMYKQRCCESCLQ
EDGSA
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgagttgggccttccatagatcatccacacagctggaggtgggctgtgacagacagctg
ggcagtggtgccacggaagacaactgcggtgtgtgtgccggcgacagttctacttgtcgg
ctggtccggggccaggcgctgcctcacgtctcaccggaagaacctgtgaagacagtgctg
gaagtccccttgggaagtaggagtttgagagtcagctccaagggacctgatgtcatagta
atcgagacccagtctctgcagggtcgtagagaggagcacagtctggtctctcccggttcc
tacctcatcggcaacaccaccgtggactaccagaaagggacagacagacagacgctcagg
acacaaggacctctgggagccgattacatcatcaaggtgaaatatgctgctcccagggac
acgatggtccagttcctgttctatcaaccaatcaggtaccagtggagagagactgacttc
ttcccctgctctgtcacctgtggaggaggttaccagctgaactcagcagagtgcacagac
atcaggtccagtcaggtgttcccagagcaccactgtaacagctaccctgagaacaccaaa
cccacgcccaaactcaaggagtgcaacatggacctctgtcctgagagtgatggcttcatc
gaggtgatgccttatgaccactttcagcctctgccacggtgggagcagggtccctggacg
gagtgttcagtgtcgtgtggggagagcggcgggctgcaggagcgcagcgtggtgtgtgtt
gaggacgacgcccacggacagatcactcaggtggaggagtggaagtgcacacactcccct
cggccaatcacgcagcagagctgcaacagcttcacctgcccacagtgggttgccatggag
tggtctcagtgcacagtgacgtgtggccgtgggttgcggtacagagtggtcctgtgtatt
gaccacaggggacagcacactggtggctgtaacacatccctcaaaccacatatcaaagaa
gactgcctggtacctgtcgcatgccacaaacccagagagtcagttcctgtggaggccaag
ctaccctggttaaaacaagcccaggagctggaagaacaacgcaccgctacagaggaacca
acgttaatcccagggccgtggtctccctgcagcgtcacctgtgggctcggcaaacagaca
cgggggctgaagtgtcgtgtcctcctctccttcacccagacggaggtggacctgcccgag
gaggagtgcggtgaagagcggccccagctggagaggccctgcgatgggggagcctgtact
ctaggcccaggcttctctcctgacctccaggatcttcaaggccctcacacccagggtgag
gagccccaccactgggactacaggggctttagtggctgctcggcctcctgtgctacaggg
agacagacagcagtggtcaggtgtgtgagccgggagagaggaggagaggaggttgacgat
cctctctgtgacccctccagccgccctccagtcatgggccgcatctgcaaccccgagccg
tgtcccccaaggtgggaggtgacagcgtggactcgttgctctgcgtcgtgtggggtgggc
atccagaccaggagtgtgttctgcatgcgtgtgctctccgtagagcagcaggatagtgtg
agtgtgtcagagaacgagtgcagggagttcaagccgtccatccttcaaccctgcaaccag
gtggactgccctccagcatgggagactgagccctggcaggagtgctccctctcctgtggc
gggggtagccaggtacgtaaggtgttctgtaaacagctgttgtctacgggggcctactgg
acactgggggacacagcatgcccaggggccaaaccggcccctcataggacctgctccaag
acggactgtctcccctacatggccgggggagagtgggggaagtgctctgtgtcctgtggt
ctgggaatccaacgtcgggagccagtgtgtcggaggctgacctcagctggacaggaggtg
atgctggcgaggaggctctgcaacggcctctcctctccacccctggtcaggacctgccga
atgatcacctgccctaagcataagacagagatgaaccccagacagcttgtgaaggaagca
tccataatcaaccagcagcccacaaaggagacagggaaggaagcatcaaagaaaacaatc
aaggagccagtaaagcgttgtccgttgattctaggcttgagtcgtatctacatccagacc
cggcaggagaaacgcctccacctgaccatcggcgggcgtgcttacctcctaccaaaaacc
tccctggtcatcaaatgccctgtccggcgcttccagaaatcctacatccgttgggagaag
gatggccgccccctgcccagctgcaagcgtctgggcgtcaccaaatctggttctctaaag
atccacagcctaggagtcgtggacagtggggtgtacgtgtgtatcgccggccccgcctca
gacacattcacccttaaactgattggcagcgacagcagactgatcgaccgaccggttgaa
aacgaatcggaccccgaacctggcctagacctgaccaggattcaaccgcgattcaaccct
caggactgggacccccagggtcttcctcactgcctcccgtttacccccagcctcaaaggt
cccagtctgtctctgctgcccggtggtgtggaggcctcggtgctgcaggtgcaggcgggg
gcctccgtgcagcagccctggagcctggaggagagggtgaggaacgtgagtctgcaggcg
gagatgggagagatcagccaggaacaggcttctcagatcatctacaccctcatcacagag
atgtctggagtacaacaggcctccacagagcagtggaaagggaccaaggaggagacgggg
aacccaaaagaccggacaccaaactcgtcagagtggtcggctagtagcttcaggagacca
gtgatcatccgacagaggcagaaccccctgatgaccttccagaggagtctgaacatcagt
gttggccagacagccttcctgaccaacgccacgcggcagttgtacctgctctgccccaca
gagggcatcccgcaaccccaaatcacctggaccaaggacggagtagagctgcaactaact
gacagggtacactgggatatctctggcggactgcatatctctagtcctgggtcgggggac
agaggagtgtacaggtgtacagcctcaaacacccacggttcagcctcagagactacacag
ctgctgttagctgagcctcctgtgatagctatgtcgtggaggaacgtatcggacaaggaa
gtccccagtctgagggctgtggtggggggacgggtcagcctacgccctggggctaaccta
actctagactgccccgtcacaggtgtgcctcagcctacagtaacttggcagaggaaggag
ggtgtgttagatgtcagcgtggcagtacccctgccctctggttctctgtggctccaaaac
gtcactctccagagccaaggcacctactcctgcgtggctgccaaccccataggaaaatcc
accgcttccactgttctccatgtcaccggtccagctccagacccagctccgggcagaggt
tctacaatgtcccagcagttcaaggagctgagcaggaggagagtcctcatggcttcacgc
atgggaaccactgtgaccatcagacctggagacatcctacgcataggatgcccagtggtt
ccagaccatagagggcctatccgttgggactaccagaaccacactctgaaggagtccacc
tggaccggaccagaccttgccccaggaaagaggctgggtcctgggcaggatcagggtctg
ggtctgggtcttcagtaccgtatactgatgggaggtcgtgttctggaggtgaacacggtg
cagggaaggttctccggacactaccggtgccagacccccatccacaacaacacacagctg
ctgtccgcttggatccacgtccatgctgaagagtttgcgtggcgtcttggggactggacg
gcgtgcagcgcctcgtgtggggaccgggggacgaggacgcggagggtccgctgtgtcacg
ccagagggatgtgaggtcacaccctccatgtgtcaccacctagacagacctgtctcctca
cagctggcctgcaacctgcatgactgcccccccagctgggtagcatccgtgtggtctaag
tgttccacttcctgtgggcggggctggagacagcggcaggtgtcctgtgggcaggtggag
tcggggggagcggtgaggacgctagcttcatctgtctgtggggggaacacgcggcctgca
gacagacaggagtgtacctgcgacaactgtccagcttgggttaccagcccctggggaaag
tgctctgggaaatgtttgggtcccaccctcacagtccagaagaggtcggtgatatgtaga
catgtcaacggcaccacacaccctgactgtgaccccagagaaaggcccgtctcagtgcgt
aactgttcgtcggaactgtgtgacgtgcactggcgcgtggggccgtggcgagcgtgcacg
gcagcctgtggcagcgggtttcagtctcgcagggtggactgtgcccaccgcaggagtggc
agaaccctggcagaccagcactgcacctggcacagacgcccagccacctggcagcactgc
aacgccaccacctgtggaagtgaatgtaaagacaccacccactactgtgccgtggtgaag
aggttaaagctttgccccatcgacatgtacaagcagaggtgttgtgagtcctgtttacag
gaggatggctccgcctag
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