Salvelinus namaycush (lake trout): 120024825
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Entry
120024825 CDS
T07522
Name
(RefSeq) genetic suppressor element 1-like
KO
K27276
genetic suppressor element 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120024825
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
120024825
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Gene cluster
GFIT
Motif
Pfam:
DUF3736
Motif
Other DBs
NCBI-GeneID:
120024825
NCBI-ProteinID:
XP_038825078
UniProt:
A0A8U0TR71
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Position
Sna30:complement(16260934..16292416)
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AA seq
1201 aa
AA seq
DB search
MSALPYVGSPTPHQGAARAQAYTEGAAWVWLLIGEGEPTSLTLTQPLGQEGGLGKRGLAW
GFGARDRGHCAWLINCASPSLPPLSLSIFLFFSQADSGPRGVSRERLGSEAPHRQEKGGP
SVPAHLMGNPYAFGLSPGAVMQDARFQPLNLPRQLPHGVPPGGVPEEYLRGFRPYATAED
LRMPSGLPLGLDPATAAAAAAYYHPSYLPHSSFAPYRMDDPFCLSALRSPFYQLQGGGGL
PPLHPSAVHMHLQGVRYPGDLTHASLSALQSERLSERLQMEDELRQREREREREREREKE
REREAEREKEREREREREREREKELEREREREREREREREKEREREREMERQKERQKERV
MREKELQSKAMESHYLAELHAMRGQEDRTKPERLTLNRPDKTKEPALQAPKPMPPGLHSS
LSQSHHGVPGLVSAHGLYLGPGGVGVGLTAAMMLQRTNEEERWLARQRMLRQEKEDRQYQ
VSEFRQQVLEQHLDLGRPGEGGELRSDTHRSIPNHHEPGGRDLHPHLGAPPPLISPKPLQ
SRDHPHPPLPTTLWNPAALIDTASDSRRTTHHDPPGLGHYDLSRLPPKLEDGLRRGRDRD
GGLEKYHPPLRGPPGLPEPSTFLAELEKSTQTFFSQQRASLSLPSQYGELGGGMKSSGAL
KSLQGPSGMGRQSQAQGHSLGQGMGPESGLMYDEFLQQHRRPVSKLDLEERRRREAREKG
YYYELDDSYDESDEEEVRAHLRRVAGQPPLKLDDSTEKVDFLCVFGLTTVSRRDHLVQQK
RRKRRRMLRERSPSPPAVLSKRTPPPPAPLSTHFTPEEMDRAPELEDKKRFLTMFSLSHV
SVQQRRDNETVVELLQAIKQKSVTLDTIRHAPQPLCKTPQAQNSDPASTLSSESDEPLSV
SPSSPGGLLGQSKPPSSSDALRPKDPPPPLPYPEKTRGLPEGPPSKRTSSSSLLNSLRPP
MQPKDAPPSLNGRTKPWESFTAEEFAQQFHESVLQSTQKALQKHKGGATVISVPSHLQDS
SVHYNIPELQSTPSRPPPPHTHPHTHPHAHSIQHPHSHPHPQPNGQHCPPHPHREPPGAR
EEQSAPEDSEEDEEEEEEEAPVPRWQGIEAIFEAYQEYIEEQGVERQVLQSQCRRLENQH
YNLSLTAEQLSHSMGELMSQRQKLAVEREKLQAELEHFRKCLTLPQPHWARGGHYKGYPP
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccctcccatacgtggggtctcccacccctcaccagggggctgccagggcccag
gcttacacagagggggcagcctgggtttggctgctcatcggggagggagagcccacctcc
ctgacgctaacacagccattagggcaggaggggggactggggaaacggggcttggcgtgg
gggtttggggcgagggacaggggccactgtgcctggctgatcaactgtgcttctccctct
ctccctcccctctcgctctctatctttctctttttctctcaggctgactcgggccctcgt
ggggtcagtagagagcgtctggggtcagaggcgccccaccggcaggagaaaggtggcccc
tcagtccctgctcacctcatgggaaacccctatgcctttggcctgagccccggagctgtc
atgcaggacgcacgcttccagcccctcaatctgcccaggcagctgccccatggagtgccc
cctggtggtgtaccagaggagtacctgcgggggttccgcccctacgccacggccgaggac
ctccgcatgccttctggactgcccctgggcctggaccccgccaccgccgccgccgccgcc
gcctactaccatccctcctacctgccacattcctccttcgccccctacaggatggatgat
ccgttctgtctatcagctctgaggtcaccgttctaccagctccaaggagggggaggcctg
ccccccctgcacccctctgctgtccacatgcacctgcagggggtccgctaccctggggac
ctcacacacgcatcactgtccgctctgcagtctgagagactgtctgaaaggctccagatg
gaagatgagctccgacagcgagagagggagcgcgagcgtgaacgagagcgcgagaaagag
agggagcgtgaggcggagcgagagaaggagcgggagagagaaagagagagggagcgagaa
agagagaaggagctggagcgggagagagagcgtgagcgggagagggagcgggagagagag
aaggagcgagagagagagagggagatggagaggcagaaggagaggcagaaggagagagtg
atgagagagaaggagctacagtccaaggcaatggagagtcactacctggctgagctccat
gccatgagaggacaggaggacagaaccaagcctgagagactcaccctcaaccggccagac
aaaaccaaagagcccgccctccaagctcctaagccaatgccaccaggcctccactcctcc
ctgagccaatcacatcacggtgttcccggcctggtctccgcccatggcctctacctgggg
cccggcggcgtgggggtggggctcaccgccgccatgatgctccagcggaccaatgaggaa
gagcgctggttggcgcggcaacggatgcttcgccaggagaaggaggatcgtcagtaccag
gtgtcagagttcagacagcaggtcttagagcaacacctggacttgggacgacctggggag
ggaggagagctacgctcagacacacacagatccataccaaatcaccacgaaccgggtggc
cgtgacctccacccccacctgggtgcccctccccccctcatatcccccaaacccctccag
tcgcgcgaccacccccacccccctctccccaccaccctgtggaaccccgccgccctcatc
gataccgcttcagactcacgacgcaccacccaccatgacccaccgggcttgggccactac
gacctcagccgcttgcctcccaaactggaggatgggctccggaggggaagggaccgggac
gggggcctggagaagtaccatccccctctccgaggccccccggggctgcctgagcccagc
acctttctggcagagctggagaaatccacccagaccttcttcagccagcagagggcctcg
ctgtccctgcccagccagtacggagagctggggggagggatgaagagcagcggggccctg
aagagccttcaggggccctcagggatggggagacaaagccaggcccagggacacagtctg
ggccagggaatggggcctgagtctggcctaatgtacgatgagtttctccagcagcaccgt
aggcctgtcagtaaactggacctggaggagaggaggaggagagaggccagggaaaaaggt
tactactacgagcttgatgactcgtatgatgagagtgatgaggaggaggtcagagcccac
ctcaggagggtagcagggcagccccctctcaaactggacgactccacggagaaagtggac
ttcctgtgtgtgtttggtctgaccacggtgtcacgacgcgaccacctggtgcagcagaag
aggaggaagaggaggaggatgctgagggagcgcagcccctcgcccccggctgtgctgtcc
aaacgcacccctcctcccccggcccccctcagcacccacttcaccccagaggagatggac
agagcccccgaactggaagacaagaaacgcttcctcaccatgttcagcctgtcccacgtc
tctgtacagcagaggagagataatgagacagtggtagaattgcttcaggccattaaacaa
aagagcgtaaccttggataccatcagacatgcccctcaacccctatgtaagaccccccaa
gcacagaactcagatcctgcctcaacgctttccagcgaatcagatgagccactcagtgtc
agtccctcctcccccggcggactcctggggcagtctaaacccccctcctcctctgacgca
ctgagaccaaaggacccccctcctccactcccctacccggaaaagacccgtgggctccct
gagggccccccctccaagaggacctcgtcatccagcctgctgaatagcctgcggcccccc
atgcagcctaaagacgctccccccagcctgaacggccggaccaagccctgggagagcttt
actgctgaagagtttgcccagcagttccacgagtctgtcctccagtccacacagaaggcc
ctgcagaagcacaaaggtggagccacagtgatctcagtgccctctcacctccaggactcc
tccgtgcactacaacattccagagctgcagagcacccccagccggccgcccccgccacac
acacaccctcacacacacccgcacgcacactccatccaacacccgcactcacacccgcac
ccccagcccaatgggcagcactgccccccgcacccccaccgagagcccccaggagcgagg
gaggagcagtctgcaccagaggactcagaagaagacgaggaagaggaggaagaggaggcc
ccagtacccaggtggcaggggattgaagcgatctttgaagcctatcaggaatacattgaa
gagcaaggtgtggagcgccaggtgctgcagagccagtgtcggagactggagaaccagcac
tacaacctgagcctgacagcagagcagctctcccacagcatgggggagttgatgtctcag
agacagaagttggcggtggagagggagaagttacaggccgagttggagcacttcaggaag
tgtctgacgctgccgcagccccactgggccaggggagggcactacaagggttaccccccc
aggtga
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