Salvelinus namaycush (lake trout): 120024878
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Entry
120024878 CDS
T07522
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 2-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120024878
03012 Translation factors [BR:
snh03012
]
120024878
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120024878
mRNA cycle factors
Stress granule specific factors
120024878
Translation factors [BR:
snh03012
]
Eukaryotic type
Initiation factors
eIF-4
120024878
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MIF4G
W2
MA3
Glyco_hydro_106
Motif
Other DBs
NCBI-GeneID:
120024878
NCBI-ProteinID:
XP_038825146
UniProt:
A0A8U0PFY5
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Position
Sna30:17782574..17787787
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AA seq
807 aa
AA seq
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MFIIDRVENGYIVQCTSPHFKQIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPSPEIQT
SQKQSTTFRRLLISKLQDEFENRARNVEIYDKHDNPLTSEEEEQHAIAKFKMLGNIKFIG
ELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHEKARSLMD
QYFGRMKSLMNNKDLPARIRFLVQDSVELRENNWVARKAFIDNGPKTINQIRQEAVKDLG
VFIPPMAQGMRTDFFLEGPFMPRLKLDRETLGGLADMFGQMPGSGIGTGPGVIQDRYSPT
MGRHRTNPLFNGHSGHTAPATQSQFEMGGKPFIKSNQNPIFQNQQQQAQSKDMAPRFIKK
GSLNADEVQHLISLRPAQSFLLNTNQVPKLQPQIPTMIPPSVQPPRTQTPPLGQPPLLGL
KTNPPPIQEKPPKTTKKPPPAKEELLKMTETIVTDYLNSKNIDEAVNGVREMKAPKHFLP
EMLSKIVICSLDCPDEDKEHASTLIHTLRTEGLVTGESFMRAFLSVLDQCPKIEVDIPLV
KSYLAQFAARAIIAELVSMDELAHPLENGTHFPLFLLCLQQTAKLKDREWLTDLFQQSKV
NMQKMLPEIDQNKDRMLEILEGKGLSFLFPLMKLEKELLKQIKADPSPQCIYKWIKDNIS
PKLHTDKGFVNILMTSFLQYIAQEINASEEEDQLSAPTKEQLDQEKQLLLAFKPVMQKFL
HDHQDLQVSALYALQVHCNARTFPKGMLLRYFVHFYDMEIIEEEAFLAWKEDITQEFPGK
GKALFQVNQWLTWLETAEEEESEEEAD
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtttattattgatcgagtggaaaacggctatattgttcagtgtacatcaccccatttc
aaacagattgttgacaaagccctcgaagagcccaagtatagctcgctttatgcacagcta
tgtctgcgcttggcagaggacgcaccaaactttgacggcccatcgccagagatccaaacg
tcacaaaaacaaagcaccacattcaggagacttttgatttctaagcttcaagatgaattt
gagaaccgtgccagaaatgttgaaatctatgacaaacatgacaaccctcttacctctgag
gaagaggagcagcatgccattgccaagtttaagatgctgggcaatatcaaattcattggg
gaacttggcaaactcgatcttatccatgaatctatccttcataagtgcatcaaaacactt
ttggaaaagaagaagagagtccaacttaaggatatgggggaagatttggagtgcctctgt
cagataatgagaacagtggggcctagactcgatcatgaaaaggctaggtctttaatggat
cagtactttggccgtatgaaatccttaatgaacaacaaggacttgccggcaaggattcgt
ttcctggtgcaggattcagtggagttgcgagagaacaattgggtggctcgcaaagctttt
atcgataatggaccaaagacgattaaccagattcgtcaggaagcagtaaaagatttgggt
gtttttattccaccaatggcccagggaatgaggactgacttctttttggaggggcccttc
atgcctaggttgaaacttgacagggaaactcttggcgggttggcggatatgtttggacag
atgccagggagtgggatcggcacaggccctggagtgattcaggaccggtattcgcctacc
atgggccgtcaccgcaccaacccactcttcaacggccacagtgggcacacagcccctgct
acccagtctcagtttgagatgggaggcaagcccttcatcaaatctaaccagaatccaatt
ttccagaaccagcaacagcaggctcagtctaaggacatggcaccgcgtttcatcaagaaa
ggatcgctcaacgctgatgaggtacaacacctgatcagcctaaggccggcacagtcattc
cttctcaacacaaaccaagtgccaaagttgcagccgcagataccaacaatgattcctcca
agtgttcaacctccacgcactcaaacgccaccactgggacagcctcctctgcttggtctg
aaaaccaaccctcctccaattcaggaaaaacctccaaagaccaccaagaaaccgcctcct
gcaaaggaagagttgcttaagatgaccgagaccatagtgaccgattacctgaacagcaaa
aacattgatgaagctgtgaacggtgtaagagagatgaaggctcccaaacacttcctgcct
gagatgttgagcaagatcgtgatctgttctcttgactgtccagacgaagacaaggagcat
gccagcaccttgatccacacactccgcacagagggccttgttactggggagagcttcatg
cgggcttttctcagtgttctggaccagtgtcccaagatcgaagtggacattcctctggtg
aagtcctacttggcccagtttgcggcgcgagccatcatcgcagagctggtgagcatggac
gagctagcccaccctctggagaatggcacccacttccccctcttcctgctttgtctgcaa
cagactgccaagctgaaggaccgtgagtggctcaccgatctattccagcaaagcaaggtc
aacatgcagaagatgctgcctgaaatcgaccaaaacaaggatcgcatgctggagatcttg
gagggcaaaggcctgagcttcttattcccactcatgaagctggaaaaggaactgctgaag
cagatcaaagcagacccctctccccagtgcatctacaagtggatcaaggacaacatctcc
cctaagctccacaccgacaagggcttcgtcaacatcctcatgaccagtttcttgcagtac
attgcccaagagataaatgccagtgaggaagaagaccagttatcagcccccactaaagaa
cagctggaccaggagaagcagctgctgctggccttcaagccagtgatgcagaagttcctg
catgatcaccaggatctgcaagtcagtgccctctacgcactgcaggtccactgcaatgct
agaactttccctaaaggaatgttactgcgctattttgtccacttctatgatatggaaatc
attgaagaagaagccttccttgcatggaaagaagacataactcaagagtttcctgggaag
gggaaagcattattccaggtgaaccagtggctgacctggctggagactgctgaggaagag
gagtctgaggaggaagctgactga
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