Salvelinus namaycush (lake trout): 120024884
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Entry
120024884 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 10-like isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120024884
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120024884
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120024884
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120024884
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120024884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
PAM2
Motif
Other DBs
NCBI-GeneID:
120024884
NCBI-ProteinID:
XP_038825155
UniProt:
A0A8U0TR38
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All DBs
Position
Sna30:complement(13870445..13903023)
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AA seq
897 aa
AA seq
DB search
MASQSNVNQYIFGEFSPDEINQFFVTPRCYVELPPFNDKVSCVSQSSGSYCTPAVPYITE
SMRRQVCGEDYQHIEFGVDEVMDLEPVGVKDPLFKVSSTLNPQAPEFILGCQPSQKVPQT
AAALSPAADVSDGAHYNSLDGPDGPDGPDGPDGPDGPDSEPSAMDSNQNCQDGDGGPGSL
GQRERKKKKKRPPGYYNYLEGSGPNSGGMGVDGPPGKGLVNGHALSGPHLGSQDMVGKTL
SGGGLSTSAPVTTAAASAAVNQRTCDSPDESSLDFTSGAASLSDGKDAASSSSSSSQSSG
VAEGGRTAEQQPENMAPESPELLGSGGHSPCPTSPPPPSVAVASPPATIATATIEEEEVT
RDSGVANGLAEPHAGISADGHKEASEALEQPQQQAPAPSVEPASSPDSEAQPAVAEQPKS
PASPAAPAANPLKSWASLFHNSKPLPGSHQAYVEVKNVVEVVAPSLAAVEQHEKAGEVKE
SPVHVSEDPMAPKLAELIESVKLIHKPVSLQPRGLINKGNWCYINATLQALIACPPMYHL
LKSIPLFNDTQRPCTSTPMMDNFVRLVNEFSNMPVPSKAKQQAAGEKIIKDIRPGAPFEP
NYIYRLLTLIKSSLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLFSPQEEKAPTPNGPES
QSGVDDDAADKEEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKE
SATLQPFFTLQLDIQSEKIRTVQEALETLVARESVQGYTTKTKQEIEISRRVTLEELPPV
LVLHLKRFVFEKTGGCQKLIKNIDYPVDLEISKDLLSSGVRSKIFKGQRTYRLFAVVYHH
GNSATGGHYTTDVFHIGLNGWLRIDDQSVKVINQYQVVKQTAERTAYLLYYRRVDLL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagagtaacgttaaccagtacatcttcggggagttcagccctgatgagatc
aatcagttcttcgtgactccacgatgttatgttgagcttccccccttcaatgacaaagtc
tcctgcgtcagtcagtcttcaggaagttactgcactcctgctgtgccttacattacggag
tctatgagacggcaggtttgcggtgaagactaccagcacattgagtttggtgtggacgag
gtgatggacttggagcctgtgggagtgaaggatcctctcttcaaggtgtccagcactctg
aacccccaggctccagagttcatcctaggatgccagccgtctcagaaggtcccgcagaca
gccgcagccctctctccggcagcagacgtttcagacggagcacactacaactccctggac
ggacccgacggcccggacggacccgacggcccagacggacccgatggcccagactcggaa
ccctccgccatggacagcaaccagaactgccaggatggggacgggggcccgggcagcctg
ggccagcgggagaggaagaaaaagaaaaagcgcccgccaggatactacaactacttggag
ggctcaggccccaatagcggtggcatgggtgtggacgggcctcctggaaaggggttggtg
aatggacacgctcttagcggccctcacctcgggtcgcaggacatggttggtaagacgttg
tcagggggcggactttccacctcagcccctgtcactacggcagcagcgtcggctgctgtg
aatcagaggacttgtgatagccctgatgaatcgtctttggacttcacgagtggagccgcc
tcattatcagatggtaaagatgcggcctcctcctcctcttcctcctctcagagcagtggg
gtggcagagggaggcagaactgcagagcagcagcctgagaacatggctccagagagccct
gaactgctgggcagcggcgggcacagcccctgccccacctcccctcctcccccctcagtt
gctgtggccagcccccctgccaccattgctactgctactattgaagaagaggaggtgact
agggacagtggggtggctaatgggctggctgagccccatgctggcatcagtgcagacgga
cacaaggaggcctctgaggcattggagcagccccagcagcaggccccagctccctcagtg
gagcctgcttcctccccagactctgaggcccagccggcagtggcagagcagcctaagtcg
cctgcctctccggctgcgcccgctgccaaccccctcaaatcctgggctagcctcttccac
aactccaagcctctgcctggaagccatcaggcctacgtggaggtgaagaacgtggtggag
gtagtggctccctccctggccgccgtggagcagcatgagaaggctggggaggtgaaggag
agccctgtccatgtatcagaggatcccatggcccctaaacttgcagaactaattgagagt
gtgaagttgatacacaaaccagtgtctttgcaaccaagaggactgatcaacaagggaaac
tggtgctatatcaacgctacattgcaggccctgattgcttgccctcccatgtatcacctg
ttgaagtccattcccctgttcaatgacacccagagaccctgtacttccacacccatgatg
gacaactttgtaaggcttgtcaatgagttcagcaatatgcctgtgccatccaaagccaag
cagcaagctgctggtgaaaagataataaaagacattcgaccaggtgctccttttgaaccc
aactacatctacagactcctcaccctcatcaagtcgagtctctcagagaagggtcgacag
gaggatgcggaggagtacctgggcttcaccctcaacggactgcatgaggagatgctggct
ttgaaaaagctcttctcccctcaggaagagaaagcccccacacccaacggcccagagtcc
cagtcaggtgtggatgacgatgctgctgataaggaggaggggagcgaggacgaatgggag
caagtgggcccccgaaataagacctcgattacccgtcaagctgactttgtccgcaccccc
atcactgacatattcggagggcacatccggtcggtggtgtaccagcaaaactctaaggag
tcagccaccctgcagcccttcttcaccctgcagctggacatccagtcagagaagatccgc
accgttcaggaggccctggagaccctggtggcacgggagtcagttcagggctacaccact
aaaaccaagcaggagattgagatcagccggagagtgaccctagaggagctccctccagtg
ctggtgctccacctcaagagatttgtgtttgagaagactggaggctgtcagaaactgatc
aagaacattgattaccctgtagacctggagatcagcaaagatctcctctcttcaggggtg
cggagtaaaatattcaaaggccaaagaacctacaggctctttgcagttgtctatcaccat
gggaacagcgctacaggcggccattacaccacggatgtcttccacatcggtctgaacggc
tggctgcgcattgacgaccagtcagtgaaggtcatcaaccagtaccaggtggtgaagcag
actgctgagcgcactgcctacctgctgtactaccgtcgcgtcgacctgctgtag
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