Salvelinus namaycush (lake trout): 120024935
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Entry
120024935 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04622
RIG-I-like receptor signaling pathway
snh04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120024935
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120024935
04625 C-type lectin receptor signaling pathway
120024935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120024935
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120024935
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120024935
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C67
120024935
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120024935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120024935
NCBI-ProteinID:
XP_038825234
UniProt:
A0A8U0TQ95
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All DBs
Position
Sna30:complement(10144360..10174264)
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AA seq
962 aa
AA seq
DB search
MSSALWSQEKSSGGFREDWRFYMVVKECTVEKPPQKTQRIPRGSLGQACQERNSLGRTLP
PSKGKRSLRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVTLVEEEMDFHQLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDI
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVD
HPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNEATPPTRAPPSASLSNDNKFHSLPFSLS
RKTGPNGSMSHGPLSLSVQSVMGEQMQMPEPPSRTPPSPRPPSPPSSRGGGGVPGLEVGS
LVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFV
KLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGI
QGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYV
CATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYF
YQIFMDKKDKVGVPTSQQLIEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLE
LDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHLRRKAHR
HGKLSVPKELQEGVWRQGSYPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSMADR
DGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSL
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagtccagtggaggattcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcctccccagaagacccagaggata
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctaccc
cccagcaagggcaagaggagcctacgcgtcctggaccagaccaacgtggtgctgagcctg
gatgagcgggatgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagccccggctagagcgggccagagac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtttggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaggatgagtgcggggtgtttgttgccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcaccctggtggag
gaagagatggatttccatcagctggagatcaactccagggtcctggtccagaccagagag
ggaccggagagaggaaccatcatcttctgtgacctgctgcctgggaatgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgacggg
aagctgctatgtaattttgccagtctggaacacacccgtctagtgcccatctgtgacata
atgccagagtactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagcaaaccaaagagcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagagttgtattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaaagcacatggtacattgatgaagtcggagaggaccct
gccaagtccctcacagacacgccccctgacttcaatgaagccacacctcctaccagggcc
ccgccctctgcttccttgtccaatgacaacaagttccactccctgcccttcagcctgagc
cgtaagacggggcccaatggcagcatgagccatggacccctctccctctccgtgcagtca
gtgatgggagagcagatgcagatgccagagcccccgtcccgtacccctccctctccgcgg
cccccctcaccccccagctctcgcgggggtgggggtgtgcctggtctggaggtggggtcc
ctggtggaggtgaaagagaacccgcccctatgtggggtcatccgctgggtggggctgccc
ccgggactaccagagccactggctggcctggagctggaggaagagtgtgttggctgtaca
gacggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggccctatttgtg
aagctgaaatgctgccggcctgactcccgtttcccctccctacaccactcctccaacccc
atagagagatgcaactctattgctttcgggggttatctgagtgaggtggtgcatgagaac
actcctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatc
cagggacactacaactcctgctacctggactccacactcttctgcctgttttccttcagc
tcagtcctggacacagttctgctgaggccgaggtccaaaactgacgtagagtattaccga
gagacacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtg
tgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcaggg
ttcacgtctgaagaaaaagatcctgaggagttcctcaatattttgttccatcacatattg
agggtggaccccttactcaagctgagatcggcaggtcagaaggttcaggactgttacttc
taccagatcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctcata
gagtggtccttcatcaacagtgacctcaaatttgctgaggctccttcctgccttatcatc
cagatgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactagag
ttagacatcacagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctg
gctctgtatgaatgcagggagtgctacgaggatggtgacatcactgccgggaagataaaa
cagttctgtgaaaagtgcaatacacaggttcacctccacctgaggaggaaggcccatcgc
cacggcaagttgtccgtccccaaggaactgcaggagggtgtgtggcggcagggtagctac
cctcgccagcggatggagctgttcgccgtgctctgcatcgagaccagtcactacgtggcc
ttcgtcaagtacggccaccaagactctgcatggctcttcttcgacagtatggccgaccgc
gacggagggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcc
tatctgaagatgacccctgaggagctgcacgccctggaccccaagagcatccagggccag
gcccgccgtctactgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctg
tacaagtag
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