KEGG   Salvelinus namaycush (lake trout): 120024937
Entry
120024937         CDS       T07522                                 
Name
(RefSeq) cadherin-5-like
  KO
K06533  cadherin 5, type 2, VE-cadherin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04514  Cell adhesion molecules
snh04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120024937
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    120024937
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120024937
   04090 CD molecules [BR:snh04090]
    120024937
Cell adhesion molecules [BR:snh04515]
 Cadherins
  Major cadherins
   120024937
CD molecules [BR:snh04090]
 Proteins
  120024937
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th Cadherin_2 TMEM132_C
Other DBs
NCBI-GeneID: 120024937
NCBI-ProteinID: XP_038825239
UniProt: A0A8U0TRR9
LinkDB
Position
Sna30:26123455..26135280
AA seq 766 aa
MMRQSAWRQMTGPDMWMGLFALAVTLGLTMAEHMDQRPALQTSPVLHRHKREWLWNNLYV
EEERPIDKQYYIGKLKSTKAGDRTRYVIKGDGANTIFKVDEKGDIYVTERLDREVKSIYH
LSAKLLDTSNNLVEEKVEEFVILVTDINDNDPVFTKSFNASIKERSKRGTKVIEVTATDA
DDPTTANGELAYTLLEGGDFFNIDSTTGIITTKYENLDRETQSSYVVVVQAQDLRGLKQG
GTATTSVTIAVSDINDNIATFTKSSYVFSVKEDMKRGQRIDTIVLEDRDEIQNKDPIFTI
ESPSDTFEMERSQIKDGNLMLKQGLDYETKSSYTFSVHVRENNLQSPADNKDNPVIKAQV
TIQVLDVDEQPEFSKSIYNFNVIEEMMVNNIGVVSARDPDKANKAIRYSIKDKDSPIGIN
PITGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFV
CENDMAGTVIGTISATDKDENFPSFSFTLVKPNGNFSIIDNNDNTSNIVLKHGGFSLEDS
RDYVIEIGISDGGRPPMSSITSLPIKVCRCDNKRIHTQCKAAQLKMGVGVYTLIPILCIL
TILVIVILIAMRKRHQKDALVTLGKSELHEQLVTYDEEGGGEMDTNGYDVSILTSARNDS
SMSMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGPESLA
GSLSSLDSSSTGSSLDYDFLNDWGPRFRTLAELYGVDGSEGSDSLY
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgatgagacagtctgcatggaggcagatgactgggccagatatgtggatgggtctcttt
gccttggccgtgaccctcggtctaaccatggctgaacatatggaccagaggccagcactc
caaaccagtccagttctccacaggcacaagagagagtggttgtggaacaacctttacgtg
gaggaggaaaggccaatcgacaaacaatactatattggaaagttaaagtcaactaaagct
ggtgacaggacacgctatgtcattaaaggagatggtgccaacacaatcttcaaagtggat
gaaaaaggagacatctacgtcactgaacgattggatcgagaggtgaaaagcatataccat
ctaagtgcaaagctgcttgataccagcaacaacttggtggaggagaaagtggaagagttt
gtgatcctggttaccgacatcaatgacaacgatccagtgtttactaaatcgttcaacgct
tctatcaaagagagatccaaaagaggaactaaagtgatagaagtcactgccactgatgca
gacgatccaacgacggcaaatggagaacttgcttacacattattagaggggggagacttc
ttcaatatagacagcacaacagggattatcaccaccaagtatgagaacctggaccgtgag
acccagagtagctatgtcgttgtggttcaagcccaggatctgagaggacttaaacaaggg
ggcaccgccaccacctctgtcaccatcgcagtcagcgacatcaatgataacatagccaca
tttaccaaaagttcctatgtatttagtgtgaaagaggacatgaagcggggacagagaata
gacaccatagtcctggaggacagagatgagatccagaataaagacccaatcttcaccata
gaatctccatcagacacctttgagatggagcgcagtcagatcaaagatggcaacctcatg
ctgaaacagggactggattatgaaaccaagagcagctacacgttcagtgtgcacgtgagg
gagaataacttgcagtcccctgcggataataaggacaatccagtgatcaaggcccaggtg
accatccaggtgctagacgttgatgagcagccagaattcagcaagagcatctacaacttt
aatgtgatagaggaaatgatggtcaataatattggagtcgtttcagccagagatcctgat
aaagccaacaaggccataaggtattccattaaggacaaagacagtcccattggtatcaac
cccataactggacaacttttcacagtgaggaagctggatcgggagcttgtagcgaatcac
atgttccaggttaaagctaaggaggaaccaaatggactggaatcttttgtgaacgtcaac
atactggtcattgatatcaatgacaacaaaccagagctgtccattgaagagatattcgtt
tgtgaaaatgatatggctggcacggtgattgggaccataagtgcgacagacaaagacgaa
aattttccctcattcagcttcacattggtgaagccgaatggcaacttttcaatcatcgat
aacaacgacaacacatctaacatagtcctgaaacatggaggcttcagcctggaggactcc
agggattatgtaatagagattgggatcagcgatggaggcaggccacccatgagcagcatc
acctctctgcctatcaaagtgtgcaggtgtgacaacaagaggatccacacccagtgcaaa
gcagcccaactcaaaatgggtgtgggtgtctacaccctgattcctatactgtgcatcctg
actattctggtcatagtgatcctgatcgctatgagaaagcgtcaccaaaaggacgccctg
gtcactctgggtaagagtgagctccacgagcagctagtgacatacgacgaggagggtggt
ggggagatggacaccaacggctacgacgtgtccatcctgacctcagctcggaatgacagc
agcatgagcatgaggcagggccccagcctttacgccatggtgaagaaaccaccaactgcg
tgcaagggagacatggctgtgatgatcgaggtgaagaaagacgaagctgaccatgacagg
gatgggattccctacgataccctgcacatctacggctacgaggggccagagtccctggct
ggtagcctcagttccctggatagttcctccacgggctctagccttgactatgacttctta
aacgactggggccctcgcttcagaaccctggctgagctctacggggtagatgggtctgag
ggaagtgactccctgtattga

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