Salvelinus namaycush (lake trout): 120025022
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Entry
120025022 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04144
Endocytosis
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120025022
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120025022
09144 Cellular community - eukaryotes
04530 Tight junction
120025022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120025022
04121 Ubiquitin system [BR:
snh04121
]
120025022
03029 Mitochondrial biogenesis [BR:
snh03029
]
120025022
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120025022
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120025022
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120025022
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
120025022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
120025022
NCBI-ProteinID:
XP_038825379
UniProt:
A0A8U0PKC0
LinkDB
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Position
Sna30:14690019..14734417
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AA seq
904 aa
AA seq
DB search
MSMAALPEVRGLMTDENEARILRVKVIAGIGLAKKDILGASDPYTRVSLYDPVNGELTSL
QTKTIKKTLDPKWNEEFFFRVHPRKHRLLLEVFDENRLTRDDFLGQVDVPLHQIPTENPN
IERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEGQDMS
GPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQNIHMEAQ
HAFTARRQISDQEDSNDRQESPESWEIMTEDESTLYNSQRSPPPPHSPLEFHSFCDELSR
LQASGATSGNRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHPVLLATSAGLPPGWEE
KQDSKSRPYYVNHNSRITTWTRPLIQITSEAAAQAVLSQNATVYQPPMLSPEGSPQHSPG
SQRECGFMPAGWEVRNAPNGKPFFIDHNTKTTSWEDPRLKIPVHMRRRPSLDPTDLGPMP
PGWEERVHSDGRIFYIDHNTKNTQWDDPRLQNSAVTGPAVPYSRDYKQKYEYFRKKLKNP
ADIPNRFEMKLRRNAVLEDSYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFLI
SKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFF
IRPFYKMMLQKPITLQDMESVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHELK
PGGSEIVVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELELL
MCGLGDVDVNDWRENTKYKNGYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPMN
GFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQGF
DGVD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggccgcacttcccgaggtccgcggactaatgactgatgagaatgaggctaga
attctgagagtgaaagtcatagctggaattggtttggccaagaaagatatccttggagcc
agtgatccatatacaagagtgtccctttatgaccctgtcaatggagaactaacaagtctt
cagactaaaacaattaaaaagacattggatccgaagtggaatgaggaattctttttcagg
gttcatcccaggaagcatcggctgttgctggaggtgtttgatgagaatcgtctgacacgt
gatgactttctggggcaggtggatgtaccattacaccagataccgacagaaaatcctaac
attgaaaggccatacacattcaaggattttctacttcacccgagaagtcacaaatccagg
gtcaagggtcatctccgtctgaagatgacctacctacccaaaaacaactcagaggatgct
gcagaacagactgaagacatggatcctagctgggagtttctagagggccaggacatgtcc
ggtcccaggcacaaccacctgctgcctgcaatgccccctggctgggaggagaggcaggac
aacctgggcaggacctactatgtcaaccacgaaaccaggacgacacagtggcacaggccc
atagtacaagacagccaggtggaggcagagcaaaggcagaacatccacatggaggcccag
cacgccttcaccgcccgcaggcagatctctgaccaagaggactccaacgacagacaagag
tctcctgagagctgggaaatcatgacagaggatgagtccaccttgtacaacagccagcgc
tccccccctccaccccattcccccctggagtttcactccttctgtgatgagctcagtcgc
ctccaggcctcgggtgccacatccggcaaccgacgtacctccctccagctgcagggccct
tccagtcattcaagtcactccagtcgcagaggcagtgcccagactctgaccgtagaggag
caccctgttcatcctgtgttgttagcaacctcagcggggctgcctccaggctgggaggag
aagcaggatagtaagagcagaccctactacgttaatcacaacagcaggataaccacttgg
acacggccactcatccagataacctcagaggcagcagcccaggctgttctgtcccagaac
gccactgtgtaccagccccccatgctctctcctgagggctccccccagcactcccccggc
tcacagagggagtgtggcttcatgccggcgggctgggaggtccgcaatgcccccaacgga
aaacccttcttcatcgaccacaacactaagaccacttcctgggaggaccccaggttgaag
attcctgtgcacatgaggaggagaccttcgctagacccaactgacctcgggccaatgccg
cctggctgggaggagagggtccacagtgatgggaggatattctacatagatcacaacacg
aagaacacacaatgggatgaccccagattgcagaattcagccgtaactggaccagctgtg
ccttactccagagactataaacagaagtatgaatacttccggaagaagctgaagaatccg
gctgacatccccaaccgctttgagatgaagctcaggcggaacgccgtgctagaggactcc
tacagacgaatcctgtcaatcaagagggccgacttcctgaaggcgcggctgtgggtggag
tttgagggagagaagggcttggattacgggggcgtggccagggagtggttcttcctcatc
tccaaggagatgttcaacccctattatgggctgtttgagtattctgctacggacaactac
actctgcagatcaaccccaactcaggcctctgcaatgaggaccacctgtcctacttcaag
ttcattggccgtgtggcaggcatggctgtctaccatggcaagctgctggacgccttcttc
atcaggcctttctacaagatgatgttgcagaagcccattactctacaggacatggagtct
gtggacagtgagtacttcaactccctgaagtggatattggaaaatgacccgatagacctg
gatctgaggttcaccatagacgaagagctctttggacagacacatcagcatgagctgaag
ccaggaggatctgaaatagttgtcaccgatgacaacaagaaggaatacatccatcttgtc
atgcagtggaggttcgtgaacaggatattgaagcagatgaccgcattcaaggagggattc
tatgagttgataccccaggatctcatcaagatctttgacgagaatgagctggaacttctg
atgtgtggcctgggagacgtggatgtgaacgactggagggagaacacaaagtacaagaat
ggctactgtcccaaccagcctgtcatcctgtggttctggaagactgttctgctgatggat
gcagagaagcgtatccgcctgttgcagtttgtgactggcacctcccgggtcccaatgaat
ggctttgctgagctctacgggtctaacggaccacagctgtttaccattgagcagtgggga
acacgagacaaactacctagagcccacacgtgcttcaaccggctggacctgcctccctat
gagtcgtttgaggagctgagggagaagctacacatcgccatagagaatgcacaaggcttt
gatggagtggattag
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