Salvelinus namaycush (lake trout): 120025063
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Entry
120025063 CDS
T07522
Name
(RefSeq) teashirt homolog 3-like
KO
K09236
teashirt
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120025063
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120025063
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2_2
zf-C2H2
zf-C2H2_6
Zap1_zf1
zf-met
Zf-C2H2_ZNF451
zf-C2H2_3rep
Homeobox_KN
zf-C2H2_jaz
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
120025063
NCBI-ProteinID:
XP_038825427
UniProt:
A0A8U0PJL8
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All DBs
Position
Sna30:23350272..23399029
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AA seq
1170 aa
AA seq
DB search
MMLCDGRLIHRQIPLHSVNIDVSYTDRVFLQMGLPPVFRAYAPEDEKEAALLDEDLEGED
SAGEEEPAVKYMCQDKDFLFNDRPGFHDSLVADFSGHELDNESHLSESSDRMSDFESASL
KNEEEVAKVPLTPLSPSSSVVMATSTAIATEDGATTGPDSLEQMKAIYTSFLTNSYWSSL
NLNLTQPPAVEKPPRSHSSSSSSSSSSCGSNGNGYDWHQSAVAKTLQQVSQNQNRLNHPA
AVQNNLFSTVQLYRQSTKLYGSIFTGASKFRCKDCSAAYDTLVGLTVHMNETGHYRDDNH
ETDSDGTKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVP
LKEPLTPVAAKIISSARKRAPIELDLPSSPDSNGGTPKPSLNDPYDPLQKASNPYITPNN
RYGHQNGASYAWQFESRKSQILKCMECGSSHDTLQELTAHMMVTGHFIKVTNSAIKKGKP
IMESPPAPIPIISAGEEKFQSVPLAATAFSPPPPPIPPPSSISPAMAVEIKKEEKEEECM
KETTNSSKDKKTGDDETEEKFDISSKYSYLTEEDLEESPKGGFDILKSLENTVTSAINKA
QNGAPSWGGYPSIHAAYQLPNIMKLSLAHSGKSSALKYMFPGGETLFQNAKNQPLISPPS
RQTSPLPKNNFHAMEELVKKVTEKVAKVEEKMREPSVRASPMRQATPSPCSSEAGESARG
ESPKERRGSKTPESIGGGSHKDCNGDANMKESLENGMESAVKSPISALCGSTAIITDHPP
EQPFVNPLSALQSVMNVHLGKAAKPALPSLDPMSMLFKMSNNLAEKAAVAASTPAQTKKH
NEHLDRYFYHVNNDQPIDLTKGKNEKSSSLGSAALSSSTSTSSSGSPSSTATMAKASSAV
ASFMSNSPLRENALSDISDMLRNLTESQASKSSTPTSLSERSDIEGSTQEELEEISPAQK
RKGRQSNWNPQHLLILQAQFTASLRQTGDGKYVMSDLSPQERMHISRFTGLSMTTISHWL
ANVKYQLRRTGGTKFLKNLDSGHPVFFCSDCASQIRSPSTYVSHLESHLGFRLRDLAKLS
GEQLVSQISRHTKSLSEKLLSNHSHSNPHSLSHAHSLSPSPDEDGSSTSYQCKLCNRTFA
SKHAVKLHLSKTHGKSPEDHLMYVCELEKQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgatgctatgtgatgggaggttgatccacaggcagattcctctgcacagcgttaacatt
gacgtgtcctacacggaccgagtcttccttcagatgggtctgcctccagtcttcagggcg
tatgcccctgaggatgagaaggaggctgccctgctcgatgaggacctggaaggggaggac
tctgccggggaggaggagcctgcggtcaagtacatgtgccaagacaaggacttccttttc
aatgaccggcctggtttccacgactccctcgtggccgacttctccggccatgagttggac
aatgagtctcacctgagtgagtccagtgaccgcatgtcagactttgagagtgcctctctc
aaaaatgaggaggaggttgcgaaggtgccactaacgcccttgtcgccatcatcctctgtc
gtgatggccaccagcacagctatagccacggaggacggcgccaccaccgggccagacagc
ctggagcagatgaaggccatctacaccagcttcctgaccaactcttactggtcgtctctg
aacctcaacctcacccagccgccagcggtggagaaacctccacgcagccacagcagcagc
agcagtagcagtagcagcagttgtggcagcaatggcaatggttacgactggcaccagtcc
gccgtggccaagaccctccagcaggtctctcagaaccagaaccggctcaaccacccagca
gcggttcaaaacaacctattcagcactgtgcagctctaccgtcagagcacaaagctctac
ggctccatcttcacaggtgccagtaagttccgctgcaaggactgcagtgctgcctacgac
acgctggtggggctgactgtacacatgaatgagacaggccactaccgtgatgacaaccac
gagacagacagcgacggcaccaagcgctggtccaagccacgtaaacgatccctcctggag
atggaagggaaagaagatgcccagaaggtcctgaagtgtatgtactgtggacattccttt
gagtctctgcaggacctcagtgtccacatgattaagacaaaacactaccagaaagtgcct
ctgaaggagccattgactcctgtggcagccaagatcatctcctccgcccggaagagagcc
cccatcgagctcgacctccccagctccccagactccaatgggggcacccccaaaccctcc
ctaaatgacccttatgaccccctccagaaggcatccaacccctacatcaccccaaacaac
cgttacggacaccagaatggagccagttatgcttggcagttcgagtccaggaagtcccag
atcctgaaatgcatggaatgtggcagctcccacgatacacttcaggagctaacagcacac
atgatggtgaccggtcacttcatcaaggtcacaaactctgccattaagaaaggcaagccc
atcatggagtctcccccagcacccatccccatcatctctgctggtgaggagaaattccag
tctgtgccactggcagccacagcattctccccacctcctccacccatacctcctccctct
agtatttcccctgccatggctgtggagattaagaaggaggagaaggaagaggaatgtatg
aaggaaaccactaacagcagcaaagacaagaagaccggagatgacgagacagaggagaaa
ttcgatatctcctccaaatactcttacttaacagaggaggatttggaggagagccctaag
ggagggtttgacatcctcaagtccttggagaacacagtgacatcagccatcaacaaagca
cagaacggtgctcccagctgggggggctaccccagcatccatgctgcataccagctgccc
aacatcatgaagctctcactggcccactcagggaagagctcagccctgaagtacatgttc
cctggaggagagacccttttccaaaatgccaaaaaccaacctctgatctccccgcccagc
cgccagacctctcctctccccaaaaacaacttccacgccatggaggagctggtgaagaag
gtgactgagaaagtagccaaggtggaggagaagatgcgggagcccagtgtaagggcgtcc
ccaatgagacaagccacaccctccccctgcagcagcgaggcaggggagtcagccagaggg
gagtcccccaaagagaggagagggtctaaaacccccgagagcatcggaggaggcagccac
aaagactgtaacggtgacgccaatatgaaggagtcgctggagaatggaatggagtctgct
gtcaaatcccccatctctgccttgtgtggcagcacagccattattacagaccacccgcca
gagcagcccttcgtcaatcctctaagtgcgcttcagtccgtgatgaacgtccacctgggt
aaggcagccaagcctgctctgccgtccctggaccccatgagcatgctcttcaagatgagc
aacaacctggcagagaaggccgcggtcgccgcttccaccccagctcagaccaaaaaacac
aacgagcacttggaccgctacttctaccacgtcaacaacgaccagccaatagacctgacc
aaaggcaagaatgaaaagagtagctccctgggttcagctgccctgtcgtcatccacatca
acatcctcctcgggctccccctcctccacagccaccatggccaaggcctcttctgctgtg
gcctcattcatgtccaactccccgctgcgtgagaacgccctgtctgacatatcagacatg
ctgagaaacctcaccgagagtcaagcttccaagtcctccacgcccaccagcctgtcggaa
aggtctgacatcgagggttccactcaagaggagctcgaggagatctctccagcccagaaa
cgcaagggccggcagtccaactggaacccccaacacctgctcatcctacaggcccagttt
actgccagcctccggcagactggcgatgggaagtatgtgatgtcagacctgagcccccag
gagaggatgcacatctctcgtttcacaggcctctccatgacgaccatcagccactggctg
gccaacgtcaagtaccagctgaggagaaccggagggacgaagttcttaaaaaacctggac
tcaggccacccagtgttcttctgcagcgactgtgcttctcagattcgttccccctccacc
tacgtcagccacttggagtctcacctgggcttcagactcagagacctggccaaactgtct
ggagaacagcttgtcagccagatctcacgtcacaccaaaagcctgtccgaaaaactgctc
tccaaccactcccactccaaccctcactccctctcccacgcccactccctgtccccctcc
cctgacgaggacggtagcagcacctcgtatcagtgcaagctctgcaaccggacttttgca
agcaagcacgcggtcaagctccacctgagcaagacccatgggaaatccccagaggaccac
cttatgtatgtgtgtgagctagagaaacagtag
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