Salvelinus namaycush (lake trout): 120025108
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Entry
120025108 CDS
T07522
Symbol
rfx7a
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120025108 (rfx7a)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Other basic domains
RF-X
120025108 (rfx7a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
120025108
NCBI-ProteinID:
XP_038825468
UniProt:
A0A8U0TRK1
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All DBs
Position
30:14636586..14680597
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AA seq
1449 aa
AA seq
DB search
MTEDQQQHDQHPKLGSGISTLPSLVPGLQGTEASALQLKIKNSICKSVQSKVDSILQDVE
TFTDIEKLYLYLKLPSGPSNSEKSDQSSMSSSRTQQMHAFNWIRSHLEEHPETSLPKQEV
YDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPS
LPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLSRQFDAVEDLARFLL
NSHYIGTKSVAALTVMTGTPTGVKMPLPSSAFGPTAEAHSFQSQVKTLPSPSIDAKQQLQ
RKIQKKQQEQMLHSPLPGEAQARRADGGTPGVGSITCRSPALLSPHPTIGIMVAAVPSPI
TVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNIPASPVGDRSSRHRYA
QILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHISSVNVVKMTTISLAPNCSTTTTL
TNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGRATTTPTIDIKMMVGEA
ISEGSPALGASRLTITQEAAGGQRAGGAIPRAASVPMPHTKGSLGPEAMTGTNCNGKSSL
RNNTVAATAGSNNNTNNESTSYLTVSNQNTSTTLSPNGGTVATSLITSKSPRKRPGVGPE
SYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRVGTPVRPESAPAIGKVTLKLNSTVP
TRILSLSDSPIGTRGFQTVVKPQISVQGRDTLTTKDTSSIGNVSAPAGHARIQHQQHMTG
NMQGMPNSSALLEQSAVSDLRNTMWVGGQLEGGKQQQQQAYAQQITDHKQASTPVMEPLA
MLGQAPASSQLSMQTDMDYFHFNDDDMTQDSIVEELVQMEEQMKLNSSLQAFGADVTLQG
HQSVIQGNMMSSNQTVTHYYQSVHSSTTPVHTPTPTPTPTSTSEMMGGGQGLTRESPCSR
MAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINSSITGYHDGSIVS
SSPVKPMQRPMATHPDKAKLEWMNNGYNNSGGNSINGISILPSYQDLVDDHFRKPHAFAI
PGQSYQSQTRHHDGHYGRLTPISPVQQQAASMANLNKQEGFAVPAPLDNKTISTSSAGGT
FRCRSVSPAVRQQNLSGNQGLQNIPRTVVSPFTSPVTPEMINIFANSHGDVSSMAQRSQS
VPVNVMMQTEVLPMQGQTNSKNITNVLLSKMDGDSDDAVRGLGINSLPSNYTARLNLTHI
LETTPSFPSSANHQTLMTSNTQNAYEFQKAGYLMKNSRNEQMILSAGDSQAQSATGEQQH
QQSQPMLLAQNLQQQQQQLQLDFSTTVKDLLADGCLTPGNRLVGQVSELNAVGSDFRLTS
DLSNSINDLNNLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSETANSNGFDWLESK
DQPTVGLMG
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagcacccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccagtgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagtcaaaggtggacagtattttgcaagatgtggag
acgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaagtgatcagagctccatgtcatcaagccgcactcagcagatgcacgcgttc
aactggattcgcagtcacctagaggaacacccagaaacctctctgcccaaacaggaggtc
tatgacgagtacaagagctattgtgacaatctctgctaccacccactgagtgcagcggac
tttggaaagatcatgaaaaatgtatttccaaacatgaaggcacgtcgacttggtatgaga
ggcaaatcaaagtactgctatagtggactgaggaagaaagcctttgtccacatgccatct
ttacccaacctggagttacataaaacaggggacgggtgtgaggtgctggaggcctcaggt
cagctgtgcagtgcggaggaggaggtgcgctctgcggcctgtggcctggtgtgtgagtgg
gcccagaaggtgctgagccgccagtttgatgctgtggaggacctggctcgcttcctcctc
aacagccactacatcggcaccaaatctgtggcagcccttactgtcatgactggtacacca
acaggagttaaaatgccactgccatcctcagcattcggaccaacagctgaagcccactcc
ttccagtcccaagtgaagaccctgccctctccctccatcgatgccaagcagcagctccag
cggaagatccagaagaagcagcaggagcagatgctgcactcccccctccccggagaggct
caggccaggcgggctgacgggggcacgcctggggtcggctccattacctgtagaagccca
gccctgctctccccacatcccaccattggcattatggtagctgcagtccccagccccatc
acggtacaaaggagcaggcagctgatgtcccccagtcctgtgggaacatcggagggcaag
attctgcctgtcaacttccaagtggtgacccagtcaatgcagcctgtcaagtgtcccaag
acccctcagaatatcccagccagccctgtgggggaccgctcttctcgccaccgctatgcc
cagatcctgcctaaaccctcagccaccagcgccatcaccctgcgctcgccccccaccctg
ctcatcaccaacagccccatcaagaccgtgatgcagcccacaccccacatcagctctgtc
aacgtggtcaagatgaccaccatatccctggctcccaactgcagcactacaaccacccta
accaacaccaccttaaggcctgcctctgctggcatgggcagcactgtagccctggaggag
agcagacccagcccacgggccaggagtggctctgcagcccccatcctgtcccccttagcc
aggtcaggccgggccaccaccacccctaccatcgacatcaagatgatggtgggtgaagcc
ataagtgagggcagtccggccctgggtgctagcaggcttactataactcaggaagctgca
gggggccagagggctggaggagctataccaagagctgccagtgtgcccatgcctcacact
aaaggctccctgggaccggaggcaatgactggaaccaattgcaatggcaagtcctctttg
cgcaacaacactgtggcagctacagctggtagcaataataacaccaataacgaaagtact
tcatatttgacagtctccaatcagaataccagcaccactctgtcacccaatggcggcact
gttgccacatcactcatcacctccaagagccccaggaagcgcccaggcgtcggcccagag
tcttatcccacgcctgtcaaaagggtcttcatctcccagcaacctcttgggggctccgat
ggttacagacatgggattggtgcaggagtgaagaaactccccagggtaggaaccccagtc
agacctgaaagtgcaccagccatcggaaaagttactttgaaactgaactctactgtccca
actcgaattctgtcactctctgattcccccatcggaaccagaggcttccagactgttgtc
aagccacagatctccgtgcagggaagagacactctgaccaccaaggacactagcagcatc
ggcaacgttagtgccccggctggtcatgcacgaattcagcaccagcagcacatgacgggt
aacatgcaaggcatgcccaacagctctgccctactggagcagtctgctgtgagtgacctg
aggaacaccatgtgggttgggggccagctggagggaggtaagcaacagcagcagcaggcc
tacgcccagcagatcacagaccacaagcaggcatccacaccggtcatggagcccctggcc
atgttgggccaggccccagcctctagccagctctccatgcagacagacatggactacttc
catttcaatgatgacgatatgacccaggacagcattgtggaggagctggtgcagatggag
gagcagatgaagctcaacagcagtctgcaggccttcggagctgacgtgacgctgcaaggc
catcagtctgtaatacagggcaacatgatgtcctccaaccagacagtgacccattactac
caatcagtacacagcagcaccacccctgtccacacccccaccccaactcccacccccaca
tccacctctgagatgatgggaggaggccagggcctgactagggagagcccctgctcccgc
atggcccccaccaccccggtggacagtgccctggggagcagccgacacacccccatcggc
actccacactccaactgcagcggcagcgtgccccccagccctgtggagtgcaggaatccc
tttgccttcactcccattaactccagcattacaggctaccacgacggcagcattgtctcc
agcagccccgtcaagcccatgcagaggcccatggctactcacccagacaaggccaaactg
gagtggatgaacaatggttacaacaacagcggggggaactccatcaacggcatcagtatc
ctccccagctatcaggacctggtcgacgaccacttccgaaagccccatgccttcgccatc
cctggccagtcctatcagtctcagacgaggcaccacgacggacactacggccgcctgaca
cccatctctccggtgcagcagcaggcagccagtatggccaacctgaacaagcaggagggc
tttgctgtgcccgcccctctggacaacaagaccatcagcacatcctcagcaggcgggacc
ttccgctgtcgtagtgtgagccctgccgtgcgccagcaaaacctgagtggcaaccagggt
ctgcagaacatcccccgaacagtggtgtcccccttcacctcccccgtgacccccgagatg
atcaacatcttcgccaacagccatggggacgtcagcagcatggcacagaggagccagtct
gtgcctgtcaacgtgatgatgcagacggaggtgctgcccatgcagggccagaccaacagc
aaaaatatcaccaacgtgctcctgagcaagatggatggggacagtgacgacgcggtgcgg
ggcctgggtatcaacagcctgccgtccaactacacagcccgcttgaacctcacccacatc
ttagagaccactcccagcttccccagcagtgccaaccatcagactctgatgacttccaac
actcagaatgcgtacgagtttcagaaggccggttacctcatgaagaactctaggaacgaa
cagatgattctctcagcaggtgacagccaagcacaatcagctactggagaacagcagcat
cagcagagccagcctatgctgctggcccagaaccttcagcagcaacaacaacagctgcag
ctagatttcagcaccaccgttaaagacctcttagcagacggctgccttactcctggcaat
aggctcgtgggacaggtgtcagaactcaacgctgtggggtctgattttcgactgacctct
gatctttccaatagcatcaatgacctgaacaatttggacacaaaccttctgtttgacccc
aatcagcagcagggacaatatgaagactctacactggaggaactgaagaatgatccgctg
ttccagcagatttgcagcgagactgcgaattccaatggatttgattggctggaaagtaaa
gaccagcccacagtcgggttaatgggttaa
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