Salvelinus namaycush (lake trout): 120025119
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Entry
120025119 CDS
T07522
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120025119 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120025119 (myo5aa)
04131 Membrane trafficking [BR:
snh04131
]
120025119 (myo5aa)
03029 Mitochondrial biogenesis [BR:
snh03029
]
120025119 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120025119 (myo5aa)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120025119 (myo5aa)
mRNA cycle factors
P-body specific factors
120025119 (myo5aa)
Membrane trafficking [BR:
snh04131
]
Others
Actin-binding proteins
Myosins
120025119 (myo5aa)
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120025119 (myo5aa)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120025119 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_16
Myosin_N
AAA_22
HTH_17
Motif
Other DBs
NCBI-GeneID:
120025119
NCBI-ProteinID:
XP_038825484
UniProt:
A0A8U0PKJ0
LinkDB
All DBs
Position
Sna30:complement(7740394..7819824)
Genome browser
AA seq
1830 aa
AA seq
DB search
MAPKGLWSKFARVWIPDADEVWKSAELTKNYKHGDSTLHLTLEDGMDIEHKLDDKTKNLP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTDSKLIYTYCGIVLVAINPYENLPIYG
SDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGAATEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKNLKLGSADVFHCTNQGRNPVIDGVD
DAKEMCTTQHAFSLLGINELNQKGLFQVLAAILHLGNVEIKDRDSDSSIIPPNNRHLTVF
CELMGVTYQDMSHWLCHKKLKTAQETYIKPIPRLQASNARDALAKHIYAKVFNWIVDHVN
KSLRATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYLKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEK
PRMSNKAFIIQHFADKVQYQCDGFLEKNKDTVNEEQINVLKASKLDLLVELFQDEEKVTS
PTGTAPGGRTRLSVKPKQIRSAGASSKEHKKTVGCQFRNSLAMLMETLNATTPHYVRCIK
PNDLKFPFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD
RRLTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRKACVRIQKTIRCWLV
RKKYLRKKHAAITIQRYTRGHQARCLVKYMRQTLAAITIQKFQRMCVQRKLYLQKQAAAL
VMQTILRAYMARQKYQGLLRNHKAVFIQKHVRGWLARQRYKRSLRAIVYLQCCIRRMKAK
KELKKLKIEARSVEHFKKLNVGMENKIMQLQRRLDEQAKDNRVTSERLSCLETSHAVESD
KLKVEVSKLKGIEEEAKNNANRVTSLLEELERLRKELTTTQKEKKTIEDWATKYRDEMEK
MVAELKQQNGLLKTEKDDLNRMIKEQSQQMTEKMTRALAEETQQLESDLNEERSRYQNLL
TEHLRLEERYDDLKEEITLSVSVPKPGHRRTDSTHSSNGSECTYNSEFAESEESSRHGEV
SGAGLRKELPLTTSLTLKLQKRVTELEQEKSSLRNELENKEEQFQRARVRDDEEHKKSRG
AELEYESLKRQELDSENKKLKHDLTAMRQSLLGNAGAGAGAPGSPPYKVLMDQLNSSCEE
LEVRKEEVLILRSQLVSQKEAMQHKDEKETMTEPVHYAEDVHKMKDSGAITQAYLGLKET
NRLLEGQMQQQRRSYDNEVEVLRGELQSVKEENNRQQQLLAQNLQLPPEARIEASLQHEI
TRLTNENLDLMEQLEKQDKTIRKLKKQLKVFSKKIGEMGAGHVETISPGQMVEETVRPVN
IPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGLPAYILFMCLRHADYVND
DQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLHCLKQYSGDESFMKHNTPKQ
NDHCLSNFDLAEYRQVLSDLAIQIYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTG
LRKRTSSIADEGTYTLESILRQLSAFHSTMCQHGTDPELIKQVVKQQFYIIGAVTLNNLL
LRKDMCSWSKGMQIRYNVSQLEEWLRDKSLMLCGAKETLEPLIQAAQLLQVKKKTDEDAE
AICSMCNSLSTSQIVKVLNLYTPVNEFEERVSVTFIRTIQTRLRDRCETPQLLMDTKIIY
PVTFPFNPSSLALETIQIPGSLNLAFLTRV
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaagggctctggtcaaaatttgctcgggtgtggatccctgatgcagatgag
gtgtggaagtcagcagagctcactaagaactacaaacatggagattccaccctacacctc
acactggaggatggaatggacattgagcacaagctggatgataagacaaagaaccttcct
cacctgcggaaccctgacatcctggtgggggagaatgacctcacagctcttagctacctg
cacgagccggccgtcctgcacaaccttaaagtccgcttcaccgactccaaactcatctac
acatactgtggtattgtgctggtggccattaatccctatgagaaccttcccatctacggt
agtgacatcatcaatgcgtacagcggccagaacatgggagacatggaccctcacatcttc
gctgtggctgaggaggcttacaaacagatggccagagatgagaggaaccagtctataatc
gtaagcggtgagtcaggagcagggaagactgtgtcagctaaatatgccatgcgctacttt
gctacggtcagtggagcagccacagaggccaacgtagaggagaaggtcctcgcatccaac
cccatcatggaggcgataggaaacgctaagacgactcgtaacgacaacagcagtcgtttc
gggaagtacattgagatcggcttcgacaaacgctaccgtatcattggagctaacatgagg
acatatctactggagaagtccagagtggtgtttcaggcggacgaggagaggaactatcat
atcttctaccagctgtgtgcgtcctcccatctaccagagttcaagaatctgaagctaggt
agtgctgatgtcttccactgcaccaaccagggccggaacccggtcatcgatggagtcgac
gatgctaaagagatgtgcacaacacaacatgccttctcactgctaggcatcaacgagttg
aaccagaaggggctgttccaggtcctggctgccatcttacatctgggcaacgtggagatc
aaggaccgagactctgacagcagcatcatacctcccaataaccgccacctgacggtgttc
tgtgagctgatgggcgtgacctaccaggacatgtctcattggctgtgccacaagaagctg
aagacagcccaggagacctacatcaagcccatccctcggctgcaagcctccaatgcccgc
gacgcgctcgccaaacacatctacgccaaagtcttcaactggatcgtggaccatgtcaac
aaatctctgcgcgccaccgtcaaacagcactccttcataggagtcctggatatctatggg
tttgagacgtttgagatcaacagttttgaacagttctgtatcaactatgctaacgagaaa
ctgcaacagcagtttaacatgcatgtgttcaagctggagcaggaggagtatttgaaggag
cagattccctggactctgatagacttctatgataaccagccatgtatcaacctcatagag
gccaagatgggggtactagacctgctggacgaagagtgcaagatgcctaaaggttcagat
gactcgtgggcccagaagctgtataacacccatctgaagacctgctctctgtttgagaaa
cctcgcatgtccaacaaagccttcatcatacagcacttcgctgacaaggtgcagtaccag
tgtgatggctttctggagaagaacaaggacacagtgaatgaagagcagatcaatgtcctg
aaggccagcaagttggacctgctagtggagctgtttcaggatgaggagaaagtgaccagt
ccgacagggaccgctccaggaggtcgaacacgactcagtgtcaaaccaaaacagatcaga
tctgctggagcaagcagcaaggagcacaagaagactgttggctgccagttccggaactct
ctggctatgttgatggagactctgaatgcgaccactcctcactatgttcgctgcatcaag
cccaacgacctcaagttccccttcacgtttgaccctaagcgagcggtgcagcagctcaga
gcctgtggtgttctggaaaccatccgcatctcagccgcaggcttcccatccaggtggacc
taccaggagttcttcagtcgttaccgggttctgatgaagcagaaggacgtcctgtcggac
aggaggctgacctgtaggaatgtcctggagaaactggtgcaggaccaggacaagtaccag
tttggtaagacgaagatcttcttcagggctggtcaggttgcctacctggagaagctgaga
gctgataagctgaggaaggcgtgcgtccgcatccagaagaccatccgctgctggctggta
cgcaagaagtacctccgcaagaagcatgctgccatcaccatccagagatacacccgcgga
caccaggcccgctgtctggtcaagtacatgcgtcagaccctggcagccatcactatccag
aagttccagaggatgtgtgttcagaggaaactgtacctacagaagcaggctgctgccctg
gtcatgcagactatcctcagagcatacatggcccgacagaaataccaagggttgctgcgt
aaccacaaagctgtgttcatccagaaacacgtgcgtggctggctggccagacagcggtac
aagcgatccctgcgagccatcgtctatctgcagtgctgcatcaggaggatgaaggccaag
aaagagctgaagaagctgaaaatcgaggcccgctccgttgaacatttcaagaaacttaac
gttggcatggagaataagatcatgcagctgcagaggaggttagatgaacaggctaaagac
aaccgtgtgactagcgagcggctgagctgtctggagacgtcccacgcggtggagagtgac
aagctgaaggtagaggtgtctaagctgaaggggatagaagaggaagccaagaacaacgcc
aaccgtgtcacttcccttctggaggagctggagaggctgaggaaggagctgaccaccacc
cagaaagagaagaagaccatagaggactgggctaccaagtacagggatgagatggaaaag
atggtagcagagctgaagcagcagaatggtctgctgaagaccgagaaagacgacctgaac
cgaatgatcaaggaacagagccagcagatgacagagaaaatgactcgtgcattagcggag
gagactcagcagttggagagcgatctgaacgaggagaggtctcgctaccagaacctcctt
acagaacacctgagactggaggaacgctacgacgacctcaaggaagaaatcactctctct
gtgagcgtgcccaagcccggccacaggagaacagactccacccacagcagcaacggatca
gagtgcacctacaactccgagttcgccgaatcagaagaaagttcccgacatggagaagtg
agtggggcgggacttagaaaggaacttcctctcaccacgtctctgactctgaagctgcag
aagcgcgtgaccgagctggagcaggagaaatcctctctccgcaacgagctagaaaacaag
gaggagcagttccagcgggctagagtcagggatgatgaggagcataagaaatcacgtgga
gcagaactggagtacgagtctctcaagcgccaggagctggattccgagaacaagaagttg
aagcacgacctgaccgccatgaggcagagcctgctgggtaatgcaggcgctggggcgggg
gcaccaggaagtccaccctacaaagttctcatggaccaactgaactcctcgtgcgaggag
ctggaggtgcggaaagaggaggtgctgattctacgatctcaactggtctcacagaaggag
gccatgcagcacaaggatgagaaggagacaatgacagagccagtgcactatgcagaggat
gtccataagatgaaggactctggtgcaatcactcaggcttatctaggactcaaagagacc
aacagactgttggagggccagatgcagcagcagcggcgtagctatgacaacgaggtggag
gtgttgcgaggggagttacagagtgttaaagaggagaataaccgtcaacaacagctgctg
gcccagaacctgcagctcccaccagaggcacgcatagaggctagtctacagcatgagatc
acacgactcaccaacgaaaacctggacctcatggaacagctggagaagcaggataaaact
atccgtaagcttaagaaacagctgaaggtgttctcgaagaagattggagaaatgggagct
ggccatgttgagactatatctccgggtcagatggttgaagagacggtccgtccggtgaac
attcctcgtcgcgagaaagacttccagggaatgttggagtacaagaaggaggatgagctg
aaactggttaagaacctcatactggagttgaagcctcgtggtgtagcggtaaatctgatc
ccaggcctgccagcctacatcctcttcatgtgtctgaggcatgctgactatgtcaacgat
gaccagaaggtcaggacgctgctcacatccaccatcaacagcatcaagaagatactcaag
aaacggggggatgactttgagacggtctccttctggctgtccaacacctgccgcttccta
cactgtctcaaacagtacagcggtgatgagtcgtttatgaagcacaacactcctaagcag
aatgatcactgcctgtctaactttgacctggctgagtaccgtcaggtcctcagtgacctg
gccattcagatctaccagcagctcatcaaatgcatggagaacatcctacagcccatgatt
gtctctggtatgttggagcatgagaccatccagggtgtgtcgggggttaagccgaccggt
ctgcgtaaacggacatcgagcatcgctgacgagggaacctacacgctggaatccatctta
cgtcagctcagcgctttccactccaccatgtgtcagcacggcaccgaccctgaactcatc
aaacaggttgtgaagcagcagttctacatcattggagctgtgactctcaacaatctgctg
ctgcgtaaagacatgtgctcctggagcaaaggcatgcagatcaggtataacgtgagtcag
ctggaggagtggctgcgtgacaagtctctgatgctgtgtggagccaaggagactctggag
cctctgattcaggctgctcagctgctgcaagtcaagaagaagacggacgaagacgccgag
gccatctgctccatgtgcaacagcctgtccacatctcagattgtaaaggtgttgaacctg
tacactccagtcaacgagtttgaagagagggtgtctgttaccttcatacgaaccatacag
actcgtttgcgggaccgctgtgagactcctcagctgttgatggacactaagatcatctac
ccagtcaccttccctttcaacccctcctctctggccctggagactatccaaataccaggc
tccctcaacctagccttccttacccgcgtctaa
DBGET
integrated database retrieval system
