Salvelinus namaycush (lake trout): 120025134
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Entry
120025134 CDS
T07522
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120025134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120025134
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
GTPases
120025134
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
120025134
NCBI-ProteinID:
XP_038825504
UniProt:
A0A8U0PIR7
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Position
Sna30:complement(2771587..2800930)
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AA seq
608 aa
AA seq
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MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYAAGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEERAVKEERAEEDKEEGDSELAECPGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSQRMGIRAEVLLKTLWGDFYLNAKAKKIMKGAHAKGKKSL
FVQLVLDNIWSLYDAVVTRRDKEKIEKMMMSLGVKVMTRDLRHSDPKVLLSAICSQWLPI
SQAVLFMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFMVDAKALPQNKQRPLTQEEMAQRRELARQRHTERLAAIQQTESGEGNAQSGST
TPATTPGGDNTIGSEGVSGQMQGLPLKAKPEEEEGKETFVAFARVYSGVVRRGQKVFVMG
PKYDPAQGLRMLPEGSTSVSACLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGRY
SNTYTYLK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagtttggataagatcaaagcactacagaagaatcctgccaacgtcagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gccagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
gctggggagaaggactacctgataaacttgattgactctccgggccatgtggacttttcg
tctgaggtgtccaccgccgtcagactatgtgatggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcgtggctggagaacatcagg
cctgtgctggttatcaacaagattgaccggctcatcatggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagtgacaggctctctg
tttacctccaaagtgctggaggagcgcgcggtgaaagaggagcgggcggaggaagataag
gaggagggggacagcgagcttgctgagtgtcccgggtcagagcaggtgtacgactggagc
gccgggctagaggattcggatgactcccagctctacttctctccagaccaggggaatgtg
gtctttgccagtgccatagacggatggggcttcagtatccagcagtttgcccagatccac
agccagaggatgggcatcagggctgaggtgctcctgaagaccctctggggagacttctac
ctcaacgctaaagccaagaagatcatgaagggagctcacgccaaaggaaagaagtcgctg
tttgttcagctcgtcctggacaacatatggagtttatatgatgctgttgttaccagacga
gacaaggagaagatagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
ttgcgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccatc
tcacaggctgtactgttcatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgtgggagcacgcaggttccactcactacccctgcag
acccaggagctgaagaccgccttcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttatggtggacgccaaggccctgcctcagaacaaacagagg
ccgttgacccaggaggagatggcccagcgcagggagctggccagacagagacacactgag
agactggcagccattcagcagacggaaagtggggagggaaatgcccaatcaggaagtaca
acaccggcaaccactcctggtggagacaacaccataggtagtgagggtgtctcaggccag
atgcagggcctgcctctgaaggctaaaccagaggaggaggaggggaaggagacgttcgta
gccttcgctagagtctacagcggggtggtccgcagaggacagaaggtgtttgtgatgggg
cccaagtacgaccctgctcaaggcctgcgcatgctcccagagggcagtactagtgtgagt
gcctgtctccctcccgtccctcacctggcctgctgcaccatggacagcctctacctgctg
atgggcagagagctggaggaactagaagaggtgccatcagggaacgtactgggtaggtac
tcaaacacctacacctacttgaagtga
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