Salvelinus namaycush (lake trout): 120025139
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Entry
120025139 CDS
T07522
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120025139 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120025139 (efl1)
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-60S particles
GTPases
120025139 (efl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
RsgA_GTPase
PEA2_middle
Motif
Other DBs
NCBI-GeneID:
120025139
NCBI-ProteinID:
XP_038825511
UniProt:
A0A8U0TRW0
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All DBs
Position
30:complement(2561849..2659640)
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AA seq
1156 aa
AA seq
DB search
MGHTSLDKIKALQKNPANVRNLCILAHVDHGKTTLADSLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYAAGEKDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIMELKLTSQEAYTHLQKILEQVNAVTGSL
FTSKVLEDRAVKEERAEEDKEEGDSEPAECPGSEQVYDWSAGLEDSDDSQLYFSPDQGNV
VFASAIDGWGFSIQQFAQIHSQRMGIRAEVLLKTLWGDFYLNAKAKKIMKGAHAKGKKPL
FVQLVLDNIWSLYDAVVTRRDKEKIEKMMMSLGVKVMTRDLRHSDPKVLLSAICSQWLPI
SQAVLFMVCDKLPSPLDMTSERIERLMSVGARRFHSLPLQTQELKTAFMQCSSDDTAPVI
VFVSKMFMVDAKALPQNKQRPLTQEEMAQRRELARQRHTERLAAIQQTESGEGNAQSGST
TPATTPGGDNTIGSEGVSGQMQGLPLKAKPEEEEGKETFVAFARVYSGVVRRGQKVFVMG
PKYDPAQGLRMLPEGSTSVSVCLPPVPHLACCTMDSLYLLMGRELEELEEVPSGNVLGIG
GLEECVLKSATLSTSPALPPFIPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPC
AEVLIQETGEHVLVTAGEVHLQRCLDDLRESFAKIEISASKPIIPFRETVIRPPKVDMVN
EDLGKQQKVAVLHQVKESDTLHLDPSGLVTLTTPNRQATVGVRAIPLPEEVTLLLEGSAD
LIRTLEQAGQAQREGRTLDMSTWTLDALMELKSRLEVLLQGRKWRNAVDRIWAFGPRRYG
PNILLNSVEGYQRTSVWHCLQREKGEKEGGEKAEASAIRDFDNSVVSGFQLATLSGPMCE
EPLMGVCFSVERWDMNFPTQRTHLASVTEEDSNSLDASVSKSPGEAAGQQEASGKAGGAG
ETPSQAEGAVAEASHGRRRAEVGAGLVDCYGPFSGQLIAAVKEACRHAFQAKPQRLMAAM
YTCEIMATAEVLGRVYGVLGKREGRVLQEEMKEGTEMFIIKAVLPVAESFGFADEIRKRT
SGLASPQLVFSHWEVISSDPSWVPTTEEEYLHFGEKADSANQALKYMNGVRRRKGLYVEE
KIVEHGEKQRTLSKNK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagtttggataagatcaaagcactacagaagaatcctgccaacgtcagg
aacctgtgcattctggcacacgtggaccatggcaaaacaactctggcagatagcttggtg
gccagcaatggcattatatcaagtcgcttagccggaaagctgaggtacctggacagccgg
gaggatgagcagatccgagggatcacgatgaagtccagcgctatctcactgcactatgct
gctggggagaaggactacctgataaacttgattgactctccgggccatgtggacttttcg
tctgaggtgtccaccgccgtcagactatgtgatggggccattgtcatcgtagatgctgtg
gagggagtttgtccacagacccaagcagtgctgcgtcaggcgtggctggagaacatcagg
cctgtgctggttatcaacaagattgaccggctcatcatggagctgaagctcacctctcag
gaagcctacacacacctgcagaagattctagaacaggtgaatgcagtgacaggctctctg
tttacctccaaagtgctggaggaccgcgcagtgaaagaggagcgggcggaggaagataag
gaggagggggacagcgagcctgctgagtgtcccgggtcagagcaggtgtacgactggagc
gccgggctagaggattcggatgactcccaactctacttctctccagaccaggggaatgtg
gtctttgccagtgccatagacggatggggcttcagtatccagcagtttgcccagatccac
agccagaggatgggcatcagggctgaggtgctcctgaagaccctctggggagacttctac
ctcaacgctaaagccaagaagatcatgaagggagctcacgccaaaggaaagaagcctctg
tttgttcagctcgtcctggacaacatatggagtttatatgatgctgttgttaccagacga
gacaaggagaagatagagaagatgatgatgtcactaggtgttaaggtgatgaccagagac
ttgcgtcactccgaccccaaagtcctcctctctgccatctgcagccagtggctccccatc
tcacaggctgtactgttcatggtgtgtgataagctgcccagtccgttggacatgacctct
gagagaatagagagactgatgagtgtgggagcacgcaggttccactcactacccctgcag
acccaggagctgaagaccgccttcatgcagtgttccagtgatgacacagcccctgtcatt
gtgtttgtgtccaagatgtttatggtggacgccaaggccctgcctcagaacaaacagagg
ccgttgacccaggaggagatggcccagcgcagggagctggccagacagagacacactgag
agactggcagccattcagcagacggaaagtggggagggaaatgcccaatcaggaagtaca
acaccggcaaccactcctggtggagacaacaccataggtagtgagggtgtctcaggccag
atgcagggcctgcctctgaaggctaaaccagaggaggaggaggggaaggagacgttcgta
gccttcgctagagtctacagcggggtggtccgcagaggacagaaggtgtttgtgatgggg
cccaagtacgaccctgctcaaggcctgcgcatgctcccagagggcagtactagtgtgagt
gtctgtctccctcccgtccctcacctggcctgctgcaccatggacagcctctacctgctg
atgggcagagagctggaggaactagaagaggtgccatcagggaacgtactgggtattggc
ggtctcgaggagtgtgtgttgaagtctgcgaccctctccacctcccctgccctcccacct
ttcatccccctcaacttcgaagctacgcccatcgtacgagtggccatcgaacccaaacac
ccaagtgagatgcctaagctggtacggggtatgaggctgttgaaccaggctgacccgtgt
gctgaggttctgatccaggagacaggagaacacgtactggtcacggccggagaggtccac
ctgcaacgctgtctggacgacctccgagagagttttgccaagattgagatcagtgcctcc
aagcctatcatcccattcagagagaccgtgatcagaccacccaaagtggacatggtcaat
gaagacctggggaaacaacagaaggtggctgtgctccaccaggtgaaagagtcagacacc
ctgcacctggaccccagcggcctggtgaccctcaccacccccaacagacaggccaccgtg
ggggtacgggccataccactacccgaagaggtgactcttctgctggagggtagtgctgac
ttgatccggaccctggagcaggcaggtcaggcccagagggaggggaggaccctggacatg
agtacctggaccctggatgccctgatggagctgaagagcaggctggaggtcctgctgcag
gggaggaagtggaggaatgccgtggaccggatatgggcctttggaccacgcaggtatgga
ccaaacatcctccttaacagcgtagaggggtaccagagaacatccgtgtggcactgcctc
caacgagagaaaggagagaaagagggaggggagaaagctgaggccagcgccatccgagac
tttgacaacagcgttgtcagcggtttccagctcgccaccctctctggtccaatgtgcgag
gagcccctcatgggcgtctgcttctctgtggagagatgggacatgaacttccccacccag
cgcacccacctggcctctgtgactgaagaagactccaactcccttgatgcatctgtttcc
aaaagccccggtgaggctgcaggacagcaggaggcctcaggcaaggcagggggagcgggt
gagacgccttcccaggcagagggtgccgttgctgaggcgagccatgggagacgcagggcg
gaggttggggccgggctagtggactgctacgggccgttctctggccagctcatagctgct
gtgaaggaggcttgtcggcacgcgttccaggccaaacctcagagactcatggctgctatg
tacacctgtgaaatcatggctacagcagaggtgttaggtcgtgtgtacggggtcctgggg
aagagggagggccgagtgttacaggaggagatgaaggaggggacagagatgttcatcatc
aaggccgtccttcctgtggccgagagcttcggattcgctgacgagatacgcaagagaacc
agtggattggctagtccacaactggtcttcagccactgggaggtgatctccagtgatccg
tcctgggttcctaccacagaagaggagtacctccactttggagagaaggctgattccgcc
aatcaggctctgaaatacatgaacggtgttcgccggcgtaaaggactgtacgtggaggag
aagatagtggagcacggcgagaaacagagaacactgagcaagaacaaatag
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