Salvelinus namaycush (lake trout): 120025169
Help
Entry
120025169 CDS
T07522
Name
(RefSeq) AP-1 complex subunit beta-1-like isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120025169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120025169
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Others
AP-1 complex
120025169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
Cnd3
RTP1_C1
Arm
HEAT_GCN1
HEAT_MROH2B_C
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
VPS15-like_hel
Arm_2
API5
FANCI_S3
Transposase_22
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
120025169
NCBI-ProteinID:
XP_038825589
UniProt:
A0A8U0PKR2
LinkDB
All DBs
Position
Sna1:complement(28311982..28365626)
Genome browser
AA seq
966 aa
AA seq
DB search
MEWANQLCENRQFGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQSINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVMHKRLPARTGSGEGTESPDMGNTAGGSAPEAATSIIPSQGDLLGDLLNLDMAPQTT
TGPTPPTSGMQMGGMDLLGGVLDSLLGGDIGGSPAMGVGFGAAPAVMPASLSAPVGGGLG
DLFDLGGGVGMPMGAYIPPKTVWLQAMKAKGLEISGTFARRAGVIQMELVLTNKAMSIMT
DFAIQFNRNSFGLAPAGPLQVLTPLGPNQTIEVSLPLSTVGPVMKMDPLNNLQVAVKNNI
DVFYFSCQYPISMLFVEDGKMERQVFLATWKDIPSDNESQFQIQDCHLNSEAASNKLQGS
NIFTIAKRTVEGQDMLYMSIKLSNGIWVLAELKVQAGNPNYTISLKCRAPEVSQCVFQCY
EAVLKN
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctaatcaattatgcgagaaccgacaatttggatccaagatgacagactcc
aagtatttcaccactacaaagaaaggagagatctttgagctgaaagccgagctgaacagc
gataagaaggagaagaagaaggaggctgtgaagaaggtcattgcctccatgaccgttggg
aaagatgtcagtgccctgtttccagatgtggtgaactgcatgcagactgacaacctggag
ctgaagaagctagtctacctgtacctgatgaactatgccaagagccagcccgacatggcc
atcatggctgtcaacaccttcgtcaaggactgtgaggaccctaacccactgatccgggcc
ctggctgtgcgtactatgggctgcatccgcgtggacaagatcactgagtacctgtgtgag
cctctgaggaaatgtctgaaggacgaggacccctacgtgaggaagactgcagctgtgtgt
gtggctaagctccatgacatcaatgcccagctggtggaggaccagggcttcctggacacc
ctcaaggaccttatctctgactccaaccctatggtggttgcgaatgctgtggcagccctg
tctgagattgcagagtcccaccctaacagtaatctgctggacctgaacccccagtccatc
aacaagctgctgacggccctcaacgagtgcaccgagtggggtcagatcttcattctggac
tgcctggccaactacacccctcgcgacgaccgcgagtcccagagtatctgtgagcgggtg
accccccgtctgtcccatgccaactctgcggtggtgctgtcggctgtcaaggtgctgatg
aagttcatggagatgcttcctaaggacctggactactatggcaccctgctgaagaagctg
gccccgcccctggtcaccctgctgtctgcagagcccgagctgcagtacgtggccctgagg
aacatcaacctcatcgtacagaaacgcccagagatcctgaagcatgagatgaaggtgttc
tttgtgaagtacaacgatcccatctacgtcaagctggagaaactggacatcatgatccgc
ctggcatctcaagctaatatcgcccaggtgctggcagagctgaaggagtatgccactgag
gtggatgtggactttgtgcggaaggcagtccgagccatcggccgctgtgccatcaaagtg
gagcaatcagcggagcgctgtgtgagcaccctgctggacctcatccagaccaaggtcaac
tatgtggtgcaggaggccatcgtggtcatcaaggacatcttccgcaagtacccaaacaag
tatgagagtgtgatcgccacgctgtgtgagaacctggactccctggatgagccggaggcc
cgggcagccatgatctggatcgtaggagagtatgctgagaggatcgacaacgctgacgaa
ctgctggagagcttcctggagggcttccacgacgagagcacccaggtgcaactgcagctg
ctgacagccatagtgaagctgttcctgaagaaacccactgagactcaggagctggtgcag
caggtgctaagcctggccacacaggactctgacaacccggacctgcgagaccgtggctac
atctactggcgtctgctctccactgaccctgtggctgccaaggaggtggtgctggccgag
aagcctctgatctcagaggagacggacctgattgagcccaccctgctggaggagctcatc
tgccacatcggcacgctggcctccgtctaccacaagcctcccagcgcctttgtggagggc
agccgcggtgtgatgcacaaaaggctccccgcccgcactggatcaggagagggtacggaa
agcccagacatgggcaatactgctgggggctctgcccctgaagctgccacctctatcatc
ccctcgcagggagacctcctgggggaccttctcaacctggacatggccccccaaaccacc
actggccccaccccccccacctccggcatgcagatggggggcatggatctccttggtgga
gttctggacagcctgcttggaggagatattggtgggagtcctgcgatgggggttggtttt
ggcgcggctcccgctgtgatgccagcctctctaagcgctcctgtgggaggtggccttgga
gacctctttgacctcggagggggggttggcatgccgatgggagcatacattccgcccaag
acagtgtggctccaagccatgaaggctaaaggtctggagatctctgggaccttcgcccgg
cgtgctggagtcatccagatggagctggtcctcaccaacaaggccatgagcatcatgact
gacttcgccatccaattcaacaggaacagttttggactggcccctgccggcccactccag
gtcctcacccctctcggcccaaaccagaccattgaagtcagcctccccctcagcactgtt
gggccagtcatgaagatggaccctctcaacaacctgcaggtggctgtgaagaacaacatt
gacgtcttctacttcagctgccaataccccatcagcatgctgtttgtggaagatggaaag
atggagcgacaggtgttcctggccacatggaaagacattcctagcgacaacgagtctcag
ttccagatccaagactgtcatctcaactcagaggcagccagcaacaagctgcagggcagt
aacatcttcaccatagccaagcgcacggtggagggccaggatatgctttacatgtccatc
aaactgtccaacggcatctgggtgctggctgagctgaaggtgcaggctggaaaccccaac
tacacgatctctctgaagtgcagagccccagaggtgtcccagtgtgtgttccagtgctac
gaggcagtgctgaagaactga
DBGET
integrated database retrieval system
