Salvelinus namaycush (lake trout): 120025199
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Entry
120025199 CDS
T07522
Name
(RefSeq) hepatocyte nuclear factor 6-like isoform X1
KO
K08026
one cut domain, family member 1 (hepatocyte nuclear factor 6)
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120025199
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
120025199
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Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120025199
NCBI-ProteinID:
XP_038825591
UniProt:
A0A8U0PJE2
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Position
Sna30:complement(7965063..7971901)
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AA seq
501 aa
AA seq
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MNAQLSMESLGDLSHESVAGPGELLVGHSPHPRPGGGRGLAHRSMGMTSLLDGGEYHSHH
GHNTGHPGHHLHPAMSMCEAPPGMSASTYTTLTPLQPPLPPISTVADKFSHHHHHHHHPH
HHPHHPHNHHQRLPGNVTGSFTFMRDERGLAPINNLYSPYHHKDAPGMGQSLSPLSGSGL
AGLHSSQAGLPPYAHPGVSASMPGEKMQLTPGGFEAHHPTMLARHADQHLTSSGNMLHIN
GLHHHHPHAHLGASGHVLGHGNPRDNNTQSHASGPGVQVQGVGGGGGTDGNSTGQMEEVN
TKEVAQRITTELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKW
LQEPEFTRMSTLRLAGERTLACKRKEQDQGHCKVGGDRGGSGGSSGGNHSGSNHSGNGGH
SKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELTTVSNFFMNARRRSLDKW
LDDNGGSSHSANSSVSTCSKA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaactgtccatggagagcctcggcgacctgagccatgagtctgtggccggt
ccaggagagctgctagtcggccacagcccacacccccgcccgggtgggggccgagggctg
gcgcaccgctccatgggcatgacgagcctgctagacgggggagaataccactcccatcac
ggacacaacactggacaccccggtcatcacctgcaccccgccatgagtatgtgcgaggcc
ccccctggaatgagcgcaagcacctacaccaccctcacacctctccagcctcccctaccc
cccatttccactgtagcagacaagttctctcatcatcaccatcatcatcatcatccacac
caccatcctcatcatcctcataatcatcatcagcgactccctggtaatgtcaccggcagc
tttacgtttatgagggacgagagggggctggcgccgatcaacaacctctactccccatac
caccacaaagacgcccctgggatgggacagagcctctccccactgtctggctctggcctg
gccggcctacacagctcccaggccggcctgcctccctatgcccaccccggggtctcagcc
tccatgccgggggagaagatgcagttgactcccggtgggttcgaggctcatcaccccacc
atgctggccagacacgccgaccagcacctcacctcctcggggaacatgctccatataaac
ggcctccatcaccaccacccccatgcccacctcggagcctcggggcacgtgctgggtcac
gggaacccccgggacaacaacacccagagccacgcctcagggcccggggttcaagtccag
ggggttggtggtggtggcggtaccgacggcaattcgacgggtcaaatggaagaagtaaac
accaaagaagtagcgcagaggatcaccacagagctgaagcgttactccatcccccaggct
atcttcgcccagagggtgttgtgtcggtcccaggggacactgtcagacctgctccggaac
cccaagccctggtccaagctcaagtccggccgggagaccttccgtcggatgtggaagtgg
ctgcaggagcctgagttcacacgcatgagcacgctcaggctcgcaggtgagcgaaccctc
gcgtgtaagcgcaaggagcaggaccagggccactgtaaagttggtggtgaccgtggcggc
agcggtggcagcagcggcggaaaccacagcggcagcaaccacagcggtaatggtggccac
tccaagaagcctcggctggtgtttaccgacgtccagagaaggaccctccacgccatcttc
aaggagaacaagcgtccatccaaggagctccagatcaccatcagccagcagctgggcctg
gagctgaccaccgtctcaaatttcttcatgaacgcacgccgacgcagcctcgacaagtgg
ctcgacgacaacggaggctcctcccactccgctaattcctctgtctccacctgcagcaaa
gcctga
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