Salvelinus namaycush (lake trout): 120025219
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Entry
120025219 CDS
T07522
Symbol
itgb7
Name
(RefSeq) integrin beta-7
KO
K06590
integrin beta 7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecules
snh04672
Intestinal immune network for IgA production
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120025219 (itgb7)
04514 Cell adhesion molecules
120025219 (itgb7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120025219 (itgb7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120025219 (itgb7)
04810 Regulation of actin cytoskeleton
120025219 (itgb7)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120025219 (itgb7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120025219 (itgb7)
04515 Cell adhesion molecules [BR:
snh04515
]
120025219 (itgb7)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120025219 (itgb7)
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin beta subunits
120025219 (itgb7)
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
EGF_integrin
I-EGF_1
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
120025219
NCBI-ProteinID:
XP_038825620
UniProt:
A0A8U0TRK0
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Position
Sna2:complement(29469541..29486901)
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AA seq
763 aa
AA seq
DB search
MVGIFILGTFLLYCVGQNQIQGVPQGCVSQPSCSACLRSPGCAWCKHKDFLKSGESSERR
CDTAESLRTRRCEQMDIINPRLDPVFLKNNDLSSNPGNVVQLKPQNLLFKLRVGVPQTFN
VSFKRAEGYPIDLYYLMDLSFSMKDDLDTIKNLGQDILSALKKVTQKVRIGFGSFVDKVA
LPYVSQVKAKKNNPCPNRLNICQPAFSFQNVLRLTEDVDKFKTRVSDQIISGNLDSPEAG
FDAIMQAAVCQSVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPHDGMCHLNDTGFYDG
TKYDYPSVGQLASVLATNNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLI
SEAYSNLSSTILLEHHEAPSGLDVTYRSHCTPEKGDNTPWQRRGECMNVKLNQQVNFTVS
LNISTCLKEKQTFSLKLQGISETLKVSVETLCDCDCQDREEQSSHCNEIGTLTCGICSCD
EGHLGQRCECERPKDMTSADSMAATCRQDNSSQLCSGHGSCECGMCTCQGIHRGNFCQCD
DNSCARHNNMLCGGNGQCDCGTCKCNDNYTGSACDCSKLTDQCRTVGKLCNGQGTCQCNQ
CQCNKHFFGINCSKIANACPKFLDCVTCELEKKKSSSLKSNCSQLCGSVKLTWMKGPQEF
PCSKDTISYKVELLPDGNILIFYADLPRSIDKTYVIIGSSVSSIIFIGIAVILISRLMLE
LHYRREYDSFLKAKEAEVWQDTKNPLFQDATTVVMNPMHIQED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgggatctttatattagggacctttctcttgtactgtgtgggacagaaccaaatt
caaggggtcccccaaggatgtgtgtcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcaaacacaaggacttcctgaagtctggagagtccagtgagcggagg
tgtgacactgctgagtctctgaggaccaggcgttgtgagcagatggacatcatcaacccc
cgattagatccagtctttctgaagaataatgatctcagcagcaacccaggcaatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagttggagtccctcagaccttcaat
gtgtcattcaagagagccgagggctaccccatagacctgtactacctgatggacctgtcc
ttctccatgaaggacgacctggacaccatcaagaacctaggccaggacatcctctctgcg
ctgaaaaaagtcacccagaaggtccgcataggcttcggctcatttgtagacaaggtggct
ctgccatacgtcagccaggtgaaagccaagaagaataacccctgtcccaaccgcctgaac
atctgtcaacctgccttcagcttccaaaatgttctgagactcacagaagacgtggacaag
ttcaagaccagggtcagcgaccagatcatctctggaaacctggactcccccgaggcaggc
tttgacgcaatcatgcaggcagctgtctgccagagtgtgattggttggaacaatgtcacc
cggatcctggtctacacgtcagatgacaccttccacattgccggggatggcaggctggct
ggtatattcgagcctcatgacggcatgtgccatctcaatgacactggcttctacgatggc
actaaatatgactacccgtcggttggccagcttgccagcgtcctggcaaccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtggtgggagtcctgaagaacgactccagcaacgtggtcctgctcatt
tcagaggcctacagtaacctgtcctccaccatcttactggagcaccatgaagctccctca
ggtctggacgtgacctacagatcccactgcacccctgaaaaaggggacaacaccccgtgg
cagaggaggggcgagtgcatgaacgtcaagctcaaccagcaggtcaacttcacggtaagc
ctgaacatctcaacatgtctgaaggagaagcagacgttttccctaaaactgcagggcatc
agcgagactctgaaggtctctgtggaaaccctgtgtgactgtgactgccaagacagagaa
gagcagtcctcacactgcaatgaaattggaacgctcacctgcggcatctgcagctgtgat
gagggtcacctgggtcagaggtgtgagtgtgagcggcctaaggacatgacctctgccgac
tctatggccgcaacatgtcgccaagacaactcctcgcagctgtgcagcgggcatgggagc
tgtgagtgtggcatgtgtacgtgtcagggcatccaccgcggcaatttttgccaatgtgat
gacaacagctgtgcccgccacaacaacatgctctgcggtggtaatgggcagtgtgactgt
ggaacatgtaagtgtaatgacaactacacaggctctgcatgtgactgttccaaactcacc
gaccagtgcaggactgttgggaagctgtgcaatggccagggaacatgccagtgtaaccag
tgccagtgcaacaaacacttctttggcataaactgctcaaagattgccaacgcatgccca
aaattcctggactgtgtgacatgtgaattggagaaaaagaagagtagcagcctaaagagt
aactgcagccaactctgtggctcagtcaagctcacttggatgaagggaccccaggagttc
ccctgcagtaaagacaccatctcctacaaagtggagctgttgcctgatggcaacatcctg
atcttctacgcagatctgcctcgctctattgacaagacttacgtgatcatcggcagctct
gtgtccagcatcatcttcattggcatcgcagtgatcctcatcagcaggcttatgctagag
ctccactaccggagagagtatgacagcttcctcaaagcaaaggaggccgaagtctggcaa
gatacaaaaaatcccttgttccaggatgccacgaccgtggttatgaaccccatgcacatt
caagaggactga
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