Salvelinus namaycush (lake trout): 120025262
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Entry
120025262 CDS
T07522
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04136
Autophagy - other
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120025262
04136 Autophagy - other
120025262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120025262
03029 Mitochondrial biogenesis [BR:
snh03029
]
120025262
Membrane trafficking [BR:
snh04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120025262
Atg1 complex
120025262
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120025262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120025262
NCBI-ProteinID:
XP_038825681
UniProt:
A0A8U0PJG5
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All DBs
Position
Sna30:complement(26840249..26850264)
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AA seq
512 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQMGVPG
KEGGVPQKVPVQPCHGAQAEHRRVSSCPPSDHVPATPSSSGEDAETSSRSVEVKSGSPCG
VLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPGSSATSSPLQ
GSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLTIDVSS
QSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtacaggtgatagtccaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaattaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcggacggtcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcatgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcatccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagctgct
gacttctgccacccctccaccttaaacgctgccaacccacaccagatgggagttccaggg
aaggaggggggcgtaccccagaaggtgcctgtgcagccttgtcatggagcccaggcagag
catcgacgagtgtcctcatgccccccttctgatcatgttcccgccacgccctccagcagt
ggtgaggacgcagagacctcgtcgaggagcgttgaggtgaagagtggctctccctgtggt
gtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacag
gtaaccacagcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctc
gaggaaaatgaccctatggttcagccgccggggtcctcagccacgtcctctcccctgcag
ggcagtttgcactcccaaggctctggtgagagtggaggcccggcacaggacgactttgtt
atggtggactttaagcctgcgttctccaaggatgacctccttcccatggaccttggcaca
ttctacagagagttccagaaccccccacagctcaccagcctcactattgatgtcagttct
cagtccatggcagaggacctggactctcttcctgaaaaactggcagtatacgagaagaac
attgatgaatttgatgcatttgtggacacattgcagtag
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integrated database retrieval system
