Salvelinus namaycush (lake trout): 120025302
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Entry
120025302 CDS
T07522
Name
(RefSeq) leucine-rich repeat-containing protein 49-like
KO
K16606
leucine-rich repeat-containing protein 49
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120025302
04812 Cytoskeleton proteins [BR:
snh04812
]
120025302
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
120025302
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
120025302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
120025302
NCBI-ProteinID:
XP_038825724
UniProt:
A0A8U0PKZ4
LinkDB
All DBs
Position
30:complement(11227956..11282216)
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AA seq
842 aa
AA seq
DB search
MRPQRQQTNNNTAITGRCLSPTVNSYKLHFTAVNSQIPERNVQRPLDVRWSKDFTKEINM
DTMKMVPPRQDSRPNAHSGRGRPCAPVLAFVNEFMGPERPLLPPAAALPSGLTGDLGPQP
HRVKPRRATHSAGAIYSHSTSPLTLPTGPGYAITLSENSPSGFPIDFRSRDDCALSPERI
DLDRRGLEECPLLEGMGRLRLLNFQHNLITHIHNLSHLRHLAFLDLYDNHISQMSGISAL
ASLRVLMLGKNRIQRICSLDNLTKLDVLDLHGNQISQIGNLSHLSELRVLNLAGNCISRV
DNLQGLDSLTEINLRRNCISTVTEVDQLPCLQRLFLSCNSITSFDELACLGESCSLSELT
LDGNPVALETWYKQAALRCVLQLRQLDMKRVTEEERRMACVTARKEDEKKRESHKQAMHK
SPAHVAPQQFYTQLGLKSQDSSVTSKEKRRLAIRNAALQWEGVRACLELPAQNGAKEEIS
PEASPAHSPAQTNGLALEPSPDEQLRRVSPLSAPDRPTGGSETRIRSTSRPNSPRDPKLL
EAGGASLQSLSLSESHLAELDGETLRLFGLGALEALERGWGVQTAGAITVIAFRYIHFDA
IVPTLPRIRVKFPNLSHLIFLETNVSRLPQLAALAQVRRLDQLTIHPEGNPVVNLSLWRS
FLIYRLHHFNLHKINNLEVTMNDVISAERLFGTLGHIAATETPRCRLLVLLEESRKRQLQ
FLLEGRGRRAGLSPEDLRDNGKLLGEGLSRALFNYPSRDCCSVGAESPEEGAMESSLERG
AMMEQYIQDQVQRASDTNLKRDSLHKLWPSMFMEMVRDYVLEMRDRPTFRQACLNRLSTQ
GK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcggccacaaagacaacagaccaacaacaatacagccattacaggaaggtgtctttct
cccacggtcaacagctataaactgcactttacagcagtgaactctcaaataccagagaga
aatgttcagagaccactggacgtccgatggtctaaagactttacaaaagagataaacatg
gacaccatgaaaatggttccaccaagacaagacagcaggcctaatgcacacagtggccgt
ggcaggccctgtgcccctgtgctggcgtttgtcaatgagtttatgggccctgagcgtccc
ctcctaccccctgctgctgctctacccagtgggctgactggggacctggggccacagcca
cacagagtgaagcctaggagagcaacccacagtgcaggggccatctactcccacagtacc
tcacccctcaccctgccaactggaccaggttatgccataacattgagtgagaattctccc
tctggttttccaattgactttcgttcccgtgatgactgtgctttgagtcctgagcgaata
gatttggacaggcgtggtctggaggagtgtcccctgctggagggcatgggtaggctgcgg
ctgcttaactttcagcacaacctcatcacgcacatccacaatctgtctcatctgcggcac
ctggccttcctagacctgtatgacaaccacatctcccagatgtctggcatctcagccctg
gcctctctcagagtgcttatgctgggcaagaacagaatccagaggatatgcagtctggat
aacctgactaaactagatgttctggacttgcatggcaatcagatctcccagatagggaac
ctctcccacctgtctgagctgcgcgtgttgaacttggcagggaactgcatctccagggtg
gacaacctgcagggcctggactcactgaccgagatcaacctgagacgcaactgcatctcc
actgtgacagaggtagaccagctgccctgcctccagcgcctctttctcagctgcaacagc
attaccagttttgatgagctagcctgcctgggagagtcgtgctccctttctgagctcacc
ctggatgggaacccagtagccctggagacatggtacaagcaggccgccctgcgctgtgtg
cttcaactcagacagctggacatgaaacgtgtcacggaggaggagagacgtatggcctgc
gtcacggcccggaaggaggatgagaagaagagggagagtcacaagcaggccatgcacaag
agtcctgctcatgttgcgcctcagcagttctacactcaacttggactcaagtctcaggac
tcctcagtgacaagcaaggagaagcggcgtctggccatccgtaatgcagcactgcagtgg
gagggggtcagggcctgcctggagctcccggctcagaacggagccaaggaggaaatcagc
cctgaggcaagccccgcccacagtcccgcccagaccaatggccttgcactggaaccttct
ccggatgagcagctcagacgggtgagtccgctgtcggctccggacaggccaacagggggc
agtgagacccgaatacgctccaccagtcgccccaacagtcctcgagaccccaagctcctt
gaggcagggggtgccagcctgcagagcctctccctgtcagaaagccacctggcggagctg
gatggggaaaccctgcgcctgttcggcctcggggccctggaggccctggagagaggctgg
ggggtccagactgcaggggccatcactgtcatagccttccgctacatccactttgatgcg
atcgtgccaacactgccacgcataagggtcaagttccctaacctatctcacctgattttc
ctggagaccaacgtcagccgtcttccccagctggctgctctggcccaggtgagacgtctg
gaccagctgaccatccacccagaggggaaccctgtagtcaacctttccctgtggagatcc
ttcctcatctatcgcctgcaccacttcaacctgcacaagatcaacaacctggaggtgacc
atgaatgacgtgatctctgcagagcgtctgtttgggacgctgggtcatatcgctgccacc
gagacaccacgctgccgcctgctagtactgctggaggagtccaggaagcgtcagctgcag
tttctgttggaggggcgtgggcgccgtgcaggcttgagcccagaggatctgcgtgacaac
ggcaagctgctgggagagggcctgagcagagccctgttcaactaccccagtagagactgc
tgcagtgtgggagcggagagcccagaggagggtgctatggagtcgtcattggagcgcgga
gccatgatggagcagtacatacaggatcaggtccagagggcatctgacaccaacctgaag
agggattccctccacaagctgtggccctccatgtttatggagatggtgagagactatgtg
ctggagatgagggaccgaccaaccttccgtcaggcctgcctcaacaggctctccacacag
ggaaagtga
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