Salvelinus namaycush (lake trout): 120025436
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Entry
120025436 CDS
T07522
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120025436
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120025436
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
V-set
LRR_EndoS
Ig_2
fn3
Pur_ac_phosph_N
LRRCT
LRRNT
LRR_NXF1-5
Sp38
Motif
Other DBs
NCBI-GeneID:
120025436
NCBI-ProteinID:
XP_038825889
UniProt:
A0A8U0PLA8
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Position
Sna2:complement(33336067..33338205)
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AA seq
712 aa
AA seq
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MAPSPLLWPPLGWLCVGLLLPLVRGGECPRLCVCEVRPWFTPQSTYREAATVDCNDLRLT
HIPSNLSSDTQVLLLQSNSIAHTSGELEALFNLTELDLSQNNFSTMEAVGLANMNQLTTL
HLEENQISQLPDHCLQDLSNLQELYINHNQISTIAPGAFSGLHSLLRLHLNSNRLRVIDN
RWFEATPNLEILMIGENPLIGILDMNFKPLGSLRSLVLACMDLTDIPGNALVGLDNLESL
SFYDNKLVRVPQLALQKVPNLKFLDLNKNPVHKIHEGDFRNMLRLKELGINNMADLVSID
RYALDNLPELTKLEATNNPKLSYVHRTAFRDVSSLESLMLNNNALNSVYQHTVEALPNLR
EISLHSNPLRCDCVTQWMSSNRTSVRFMEPLAMLCTSPPELRGQRVREVKLQDSPEQCLP
FISHDTFPSHLSLELGMSVSLDCRAMAEPEPEIYWVSPMGSKITVDTVSERYHLSSEGTL
RLSHVQVEDSGRYTCVAQNTEGADTRVTTIRVNGTLVDSAEVMKIYVKQTESHSILVSWK
INSNVMTSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVSNIHLQ
THKSCVNVTTRSVTFTLDVLDQRPSAALLAVMATMLAFLSLATVGVYVARRWKRKNYHHS
LKKYMQKTSSIPLNELYPPLINLWEADSEKDKEGGTESKPSPVDTTRSYYMW
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctccaagccccctcctctggcccccgctgggatggctgtgtgtggggctgcttttg
cccctggtgcggggcggggagtgcccgcggctgtgtgtgtgtgaggtgcgcccctggttc
accccccagtccacctacagggaggcggccacggtggactgcaacgacctgcggctgaca
cacatcccctccaacctgtcttctgacacccaggtgctgctgctccagagcaactccatc
gcccacaccagcggggagctagaagccctgttcaacctgacggagctggacctgtcccag
aacaacttcagcacaatggaggctgtgggcctggccaacatgaaccagcttaccaccctt
cacctggaggagaaccagattagccagcttcctgaccactgcctgcaggacctcagcaac
ctacaggagctctacatcaaccacaaccagatcagcaccatcgcccctggggcgttctcc
ggtctgcatagcctgctgcgcctccacctcaactccaacaggctccgggttatcgacaac
cgctggttcgaggcaacgcccaacctggagatcctgatgatcggagagaaccctctcatt
ggcatcctggacatgaacttcaagcccctggggagcctgaggagcctggtcctggcctgc
atggacctcactgacattcctgggaatgctctggtgggcctggataacctggagagccta
tccttctacgacaacaagctggtccgggtgccccagctggccctgcagaaagtgcccaac
ctgaagttcctggacctgaacaagaacccagtgcacaagatccatgagggagacttcagg
aacatgctgcgtctgaaggagcttggtatcaacaacatggctgacctggtatccatcgac
cgttacgccctggacaacctgcctgagctgaccaagctggaggccactaacaaccccaag
ctgtcctacgtgcaccggacggccttcagggacgtgtcctccctggagagcctgatgcta
aacaacaatgccctcaactctgtctaccagcacaccgtggaggcgctgcccaacctccgc
gagatcagcctgcacagcaacccactgcgctgcgactgtgtcacccagtggatgagctcc
aacaggactagcgtgcgcttcatggagcccctggctatgctgtgtacctcgccgcccgag
ctccggggccagcgagtcagagaggtgaagctgcaggactccccagagcagtgcctgccc
ttcatctcccacgacaccttccccagccacctgagccttgagctgggcatgagtgtcagc
ctggactgcagggctatggctgagcctgagccagagatatactgggtgtctcctatgggg
agcaagataacggtggacacggtgtcggagcgttaccacctgagcagtgagggcaccctg
cgactgtcccacgtccaggtggaggactcaggtcgctacacctgcgtagcccagaacaca
gagggcgccgacacacgcgtcaccaccatccgcgtcaatggcaccctggtggacagcgcc
gaggtgatgaagatctacgtcaagcagaccgagtcccactccattctggtctcctggaag
atcaactccaacgtcatgacctccaacctcaagtgggcatcggccaccatgaagattgac
aacccccacatcacctacactgcacgcgtgcccgtcgacgtgcacgagtacaacctgacc
cacctgcagccggccaccgagtacgaggtgtgcctcactgtgtccaacattcacctgcag
acccacaagtcgtgcgtcaacgtgaccacgcgcagcgtcaccttcaccctggacgtgttg
gaccagagacctagcgccgccctgctagccgtcatggccaccatgctggccttcctcagc
ctggctactgtgggggtgtacgtggcccggcgctggaagaggaagaactaccaccactcc
ctgaagaagtacatgcagaagacctcctccatccccctcaatgagctctacccgcccctc
atcaacctatgggaggcagacagtgagaaggacaaggagggcggtacagagagcaagccc
tcccccgtggacaccacacgcagctactacatgtggtga
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