Salvelinus namaycush (lake trout): 120025445
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Entry
120025445 CDS
T07522
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120025445 (srek1)
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120025445 (srek1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
120025445
NCBI-ProteinID:
XP_038825913
UniProt:
A0A8U0PIS1
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Position
Sna31:23474717..23487429
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AA seq
531 aa
AA seq
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MSGIPGTAVIQITNLSSAVSSEQMRTLFGFLGDVEELRLYPPDNAPLPFSSKVCYIKYRE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPPAVPSLMPGAGLLPL
PTSAPIQTQLSVPIVSLAALPAALDPAVSALAVTGAGGVSSSTQPPLMGNVDPSKVNEIR
RTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVSRALTF
NGVMFGDRPLKINHSNNAIVKPPELTPQAAAKELEDVMKRVREAQSTIAAIIVEPEEVKK
RSSSHSRRSRRSRTRSRSHSRSRTRRKRSRSRQRSRLSQRSRPKVSETHVSRGIHKRLSR
SRSRDRRKEREQRTRGNEDISRVIEDRRQREKKAKTPPKSYSASRRSRSTSRGHRRKSRD
RSRSPRRKARSPSPKRGRKDKKREKPRDGSREKRESSNSRKKSSRDKEKMELKAKPMKVE
RDYDREEKDYQSDREGSATPSDGLTSPCIQHNGSYNTNTEDDAASLADSTE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaattccaggcaccgctgtcattcaaatcaccaatctgtcgtctgccgtgagt
agtgagcagatgcgcactctcttcggctttcttggggacgtcgaggagttacgtctttac
cccccggacaatgcaccactccccttctcgtccaaagtatgttacataaagtatcgagag
ccttccagtgttggcgtggcgcaacatttaaccaacactgtatttattgacagagctttg
atcgtagtcccatgtgcagaagggaagatcccagaagaagccaaggccttgtctctcttg
gcacctgctgccccccctgctgtacccagcctgatgccaggcgccggcctgctgcccctt
cccacctcggcccccatacagactcagctgagtgtccctatagtgagcctggcggcattg
ccggctgccctggaccctgcagtgtcggccctggctgtgactggagcaggtggggtgtcg
tcctccacccagccccccctcatggggaacgtggatccctccaaggtgaacgagatcaga
aggactgtctacgttggcaacctcaactcgcagaccactactgcagagcagctgctggaa
ttctttaagcaggtgggcgacgtaaagtttgtgcgcatggcaggggacgagacgcagccc
acacgcttcgccttcgtggagtttgccgaccaggattcagtgtccagagcgctgaccttt
aacggagtcatgttcggagacagacccttgaagattaatcattccaacaacgccattgtg
aagcccccagagctgacccctcaggctgcagccaaggagctggaggacgtaatgaagagg
gtcagagaggcccagtccaccatcgccgccatcatagtagagccagaggaggtgaagaaa
cgctcatccagtcactcccgacgttccaggagatccagaacacggtcacgatcgcattcc
cgttcgagaacaaggaggaagcggtcccgttctaggcagagaagcaggctctctcagagg
tcgcggcccaaggtcagcgagacccacgtctctcgggggatccacaagagactttcacgc
tccagatcacgggacaggcggaaagagagagagcagagaacgagaggaaatgaggatata
tctcgggttatagaggataggaggcagagggagaaaaaggccaaaacacctccaaaaagc
tacagtgcatcccgaaggtccaggagcacgagcaggggccacagaaggaagagcagggat
cgttctaggagtcccagaaggaaagccaggtctccctcaccaaagagggggaggaaagac
aagaagagggagaaaccaagggatggcagcagggaaaagagggagagttccaactccagg
aagaagagcagcagagataaagaaaagatggagctcaaggccaaacctatgaaggtggaa
agggactacgacagggaggagaaggactaccagagtgacagggaggggtcggcaacacca
agcgatggtttgacatcaccctgcatccagcacaacggcagctacaacacaaacacagag
gatgacgcggcctcgctcgccgacagcactgagtga
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