Salvelinus namaycush (lake trout): 120025512
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Entry
120025512 CDS
T07522
Name
(RefSeq) homeobox protein Hox-C5-like isoform X1
KO
K09305
homeobox protein HoxA/B/C5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120025512
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120025512
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
120025512
NCBI-ProteinID:
XP_038826011
UniProt:
A0A8U0PK76
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Position
2:34241089..34242897
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AA seq
249 aa
AA seq
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MSSYVANSLFKQTHEASAFALNNHGYGSSPELNLSGYCGFGGHDHRGSFASPPSSSALGM
VEMNSGLHGNPGDLTLRPESSTGDASQRRHMNEQTSRQGSLNLGLYCRKPETDSDFSEMH
ICKTQTGDIKVVTLQPVQPVRQGNHSTQPQTSEPQPQIYPWMTKLHMGHDYCSLNYTPEA
DGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLNERQIKIWFQNRRMKWKKD
SKLKIKESI
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttacgtagccaactcattgtttaagcaaactcacgaggcgtcagccttcgct
ttgaacaaccatggatacggctctagccccgaactcaacttgtcaggctactgtggtttt
ggagggcatgatcaccgggggtcattcgcgtccccgccgtcttcgagcgcccttggcatg
gtagagatgaactctgggctgcatggcaatcctggcgaccttacactacgaccagagtct
tccacaggagacgcttcccagagacgccacatgaacgagcagacaagccgccagggttct
ctaaatctcggactgtattgtcgcaaacccgagacggactcggatttcagcgaaatgcat
atctgcaagactcaaacaggcgatatcaaagtcgtaactttgcaacccgtccagccagta
agacaaggaaaccattctactcagccacaaaccagcgaaccgcaaccacaaatatatccc
tggatgactaaactacacatgggtcacgattattgttctctcaattacactccagaggct
gacggtaaaaggtcaaggacgagttacacgcgctaccaaactctggagttggagaaagag
ttccatttcaaccggtatctgacgcgtcgtaggcgcatcgagatcgcccatactctctgt
ctgaacgagaggcagatcaaaatctggttccagaaccgccgaatgaagtggaagaaggac
tcaaagcttaaaattaaagagtcaatctaa
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