Salvelinus namaycush (lake trout): 120025563
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Entry
120025563 CDS
T07522
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120025563 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120025563 (myo5b)
04131 Membrane trafficking [BR:
snh04131
]
120025563 (myo5b)
03029 Mitochondrial biogenesis [BR:
snh03029
]
120025563 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120025563 (myo5b)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120025563 (myo5b)
mRNA cycle factors
P-body specific factors
120025563 (myo5b)
Membrane trafficking [BR:
snh04131
]
Others
Actin-binding proteins
Myosins
120025563 (myo5b)
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120025563 (myo5b)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120025563 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
Ac76
AAA_16
SANBR_BTB
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120025563
NCBI-ProteinID:
XP_038826048
UniProt:
A0A8U0PJ20
LinkDB
All DBs
Position
Sna31:33320481..33373771
Genome browser
AA seq
1839 aa
AA seq
DB search
MEMYTRVWIPDPEDVWRAAEIIKDYKEGEPILHLKLEDESPLEYRIGPKDNPLPFLRNPD
ILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYDQLQIYGEEVINA
YSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFFATVGGS
ANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANMRTYLLEK
SRVVFQAEDERNYHIFYQLCASASFPEFKDLALTSAEDFIFTSQGENIFIEGVNDAEDFK
KTKEAFTLLGVKESNQSSIFRIIASILHLGNVEICSERDGDSCHISRNDPHLTHFCRLLG
VELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDALAKHIYAHMFDWIVEHVNKSLHT
SSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNQHVFKLEQEEYMKEQIPWT
LIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWCQKLYDRLSSSVHFQKPRMSNI
SFIIIHFADKVEYQCDGFLEKNRDTVYEEHINILKASKFQLVADLFQDTNKDGSSSTSSS
KSSRINVRSAKPTPKVPNKEHRKTVGHQFRSSLQLLMETLNATTPHYVRCIKPNDEKEAF
SFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKSDMTVGDKKLVCRN
LLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRRWLQMARYKKI
RKSAITLQRFGRGYMARRYAEQLRLSRAAVICQKQYRMVRERRGYLRVRQAVVTIQAFTR
GMFTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFKVARNAAITIQCAYRRMRAKRELKQLK
IEARSAQHLKKLNTGMENKIVQLQRKMDDQTKDLKTQNEQLVVAKASLGSEVNKLQKELE
TMRSRQGDGGQLTSLKDELEKLRAELQEAHAHRKKLEEEHSNEKMRFEQRVEELERENSL
LKSEKEKMNQRILHHSKSTEDQESSASQSVGRVQAELDEERQRYQNLLREFSRLEQRYDN
LQEAKVRFQPGHRRNNSNQSSLESDSNYPSISTSEVGDTDDAIQLVEEMGVEKAAMDIGV
FMKLQKRVRELEQERKRLQVNLEKIEDQSKRKGIEPKMTSEQENADLAYNSLKRQELESE
NKKLKNDLNELRKAIADRASKNSSSNELQDGYNLLLGQLKAANEELDVRKDEVLILRSQI
VTAAQQKEKETTNHIETNNLPEWTNSKKPIDKEEALRSYHGLCESKNKASDWGYLNEDGE
LGLAYQGLKQVARLLEAQLQSQARKHEDELEAFHTQVELLKDDIEKKQEMLNHTMSLSPE
AQVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEASQSTTAKPE
MTRQVTVQRREKDFEGMLEYYKEDEALLVKTLITDMKPHAVSATVPCLPAYILFMCIRHA
DYINDDQKVHSLLTSTINAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQ
NTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLVKVAEHVMQPMIVSAMLESESIPSLAG
VKPMGYRNRSSSMDKDEEGPGSYTLEALIRQLGQFHVVMGEHGLDPEIAGQVVRQLFYSI
NAVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGKNLHQSGAVVNMEPVIQAAQLLQV
KKKTSQDAEAICSLCTALTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDVPM
LLVDTKHTFPVLFPYTPSALSLETLHIPANLSLHFLTRV
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtacactcgggtgtggatcccagacccagaggatgtatggagagctgcagag
atcatcaaggactacaaggagggagagccaatcctgcacctcaaacttgaagatgaatcg
ccgttggaataccgcatcggacccaaagacaaccctcttcccttcctccggaaccctgat
atcctggtgggggagaatgacctcacagcgctcagctacctgcacgagcctgctgtcctg
cacaacctcaaagtgcgcttcctcgagcccaaccacatctacacatactgtggtatcgta
ctggtggccatcaacccctacgaccagcttcaaatctatggagaggaggtcatcaatgcc
tacagtgggcagaacatgggagacatggacccacacatctttgctgttgctgaggaggca
tacaagcagatggccagagatgagaggaaccaatccatcatagtaagtggggagtcgggg
gcagggaagaccgtctctgctaagtacgccatgcggttcttcgccactgtgggagggtcg
gccaacgacaccaacgttgaggagaaggtgctggcctccagccccatcatggaggctatt
ggaaatgcgaaaaccacgcgcaatgacaacagcagtcgttttgggaagtacatccagatt
ggttttgacaggcgttatcacataataggtgccaacatgcgcacgtatctgctggagaag
tcaagggtggtgttccaggctgaggatgagaggaattaccacatcttctaccagttgtgt
gcctctgctagcttcccggagttcaaagacctagccttgaccagtgcggaagacttcatc
ttcacatcgcaaggagagaacatcttcattgagggggtgaatgatgccgaggacttcaag
aagacgaaggaagcctttacactactgggtgttaaggagagcaatcaaagcagcatcttc
agaatcatagcttccatcctgcatctggggaacgtggagatctgctcggagagagacgga
gactcctgccacatatcaaggaacgaccctcacttgacgcacttttgccggttgctgggg
gtggagctggagcagatggaacactggctatgtcacaggaagctggtcaccacgtcagag
acctacgtcaagaacatgtcccgcaaacaggcggctaatgcccgcgacgcgctcgccaaa
cacatctacgcacacatgtttgactggattgtggagcacgtcaacaagtctctgcacacc
tcctccaaacaacactccttcatcggtgttctggatatctatggatttgagacctttgag
ataaacagcttcgagcagttctgcatcaactacgccaatgagaaactgcagcagcagttc
aatcaacatgtgttcaagctggagcaggaggagtacatgaaggagcagatcccctggacg
ctcatcgacttctatgacaaccagccgtgtatcgacctcatcgaggccaagttgggtatc
ctggacctgctggatgaggagtgcaaggtgccaaaagggacagatcagaactggtgccag
aagctgtacgatcgcctttcaagcagcgtccatttccagaaaccacggatgtccaacata
tctttcattatcattcactttgctgataaggttgagtaccagtgtgatggcttcctggag
aagaacagagacaccgtctacgaggaacacatcaacattctgaaggccagcaagtttcag
ctcgtggcggatctgttccaagacactaataaagacggaagcagctccacgtcttccagc
aagtcctccaggatcaacgtgcgctcggccaaaccaacacctaaagtccccaacaaggag
cacaggaaaaccgtgggccaccagttccgcagctccctgcagcttctcatggagaccctg
aatgccaccaccccccactatgtgcgttgcatcaagcctaatgatgagaaggaggcattc
tcgtttgactctaggagagctgtgcagcaactgagggcatgtggggtcctggagaccatc
cgcatcagtgctgctggctacccatcaaggtggacgtacccagacttcttcaacagatac
agagtcctcatgaagaagtcagatatgaccgtaggagacaagaaactggtgtgtaggaac
ttactagagaccctggtcaaggacccagacaagttccagtttggtaagaccaagatcttc
ttccgggcgggccaagtggcctacctggagaagctgagggcagacaagttccggtccgcc
tgcatcaagatccagaagacagtgcgacgctggctacagatggcccgctacaagaagata
cgcaagtctgccatcaccttgcagagatttggccgcggttacatggcccgcaggtatgcg
gagcagctgcgtctaagccgcgctgctgttatctgtcagaagcagtatcgtatggtccga
gagcggaggggctatctgagggtgagacaggctgttgtcaccatccaggcctttaccagg
ggcatgttcacccgcaggatcttccaggagttccttctgcatcacaaagccatgatcatc
cagaagcatgtccgaggctggcttactaggaggaagttcaaggtggcacggaacgccgcc
atcaccatccagtgtgcttaccgccgcatgcgagccaagcgtgagctgaaacagctgaag
attgaggcgaggtccgctcaacatctgaagaagctcaacacgggcatggagaacaagatt
gtccagctgcagaggaagatggatgaccagaccaaagatctgaagactcagaatgagcag
ctggtggtggccaaagcctccctgggctcagaggtgaacaagctgcagaaggagctggag
accatgcgcagtcgccagggagacggcggtcagctgacctctctgaaggatgagctggag
aagctgagggcggagctccaggaagcacacgcccacaggaagaagctggaggaggagcac
agcaacgagaagatgagatttgaacagagagtggaggagctggagagggagaattccctg
ctgaagagtgaaaaggagaagatgaaccaaaggattctgcaccactccaagagcacagaa
gaccaggagagcagtgcatcccagagtgtgggtcgggtccaggcagagctggatgaggag
aggcagcgctaccagaacctgctcagggagttctccagactggagcagagatatgacaac
ctacaggaggccaaggtgcgttttcagcctggccacaggaggaacaattctaaccagagc
agcctggagtctgactccaattatccctccatttctacctcggaggtgggagacactgac
gatgccatccaactcgtagaggagatgggagtggagaaggcagcaatggacatcggtgtg
ttcatgaagctgcagaagcgtgttagggagctggaacaggagaggaagagactgcaagtc
aacctggaaaagatagaggaccagtctaagcgcaagggcattgagccaaagatgacatca
gagcaagagaatgcggatctggcctacaacagtctcaagagacaggagctggagtctgag
aacaagaagctgaagaatgacctgaacgagctgaggaaggccatcgctgaccgcgcctcc
aagaacagctcctccaatgagcttcaggacggctacaacctgctgctgggccagctcaag
gcagccaatgaggagctggatgtgcgtaaggatgaggtccttatcctcaggagtcagatt
gtcactgcagcccagcagaaagagaaggagacaaccaatcacattgaaactaataacttg
cctgaatggaccaacagcaagaagcccatagacaaggaggaggctctgaggtcctatcat
ggactctgtgagtctaagaacaaagcttcagactggggttatttgaatgaagatggcgag
ctgggcctggcataccagggtctaaagcaagtggccaggctgttagaggcccagctccag
tctcaggccaggaagcacgaggatgagctggaggcgttccacacccaggttgagttgcta
aaggacgacatagagaagaagcaggagatgctgaaccacaccatgtctctgtcccctgag
gcccaggtggagtacagcgtccagcaggagatcacccgcctcaccaacgacaacctggac
ttaaaagagcttgtggagaaactggagaagaacgagaggaagctgaagaagcagctgagg
atctacatgaagaaagtacaggagctggaagcatcccagtccaccacggccaaaccagag
atgacccgtcaggtgactgtccagcgcagagagaaggactttgagggcatgctggagtac
tacaaagaggacgaggccctgctggtcaaaacgctcatcacagacatgaagccccacgct
gtatcagcaacagtgccctgcctacctgcctacatcctcttcatgtgcatccgccatgcg
gactacatcaacgatgaccagaaggtccactctctgctcacctccaccatcaacgccatt
aagaaggtcctcaagaaaaacaatgatgactttgagatgacctccttctggctggccaac
acgagtcgtctgctgcactgtctcaagcagtacagtggagatgaggcgtttatgactcag
aacacggccaagcagaatgagcactgtctgaagaactttgacctggcagagtaccgccag
gtgctgagtgacctctccatccagatctaccagcagctcgtcaaggtggcagagcacgtc
atgcagcccatgatcgtgtcggccatgttggagagtgagtctatccccagccttgcggga
gtgaagcccatgggttacaggaaccgctcctccagcatggacaaggacgaggagggccca
gggagctacaccctggaggccctgatcagacagctgggccagttccacgtggtgatgggc
gagcacggcctggacccagagatagcaggccaggtggtccggcagctgttctacagcatc
aacgctgtcaccctcaacaacctgctgctcaggaaagacgtctgctcctggagcactggc
atgcagctccggtacaacatcagtcagatggaggagtggcttcgggggaagaacctccac
cagagtggggcggtggttaacatggagcccgtcatccaggccgcccagctgcttcaggtc
aagaagaagacgtcccaggatgccgaggccatctgctcactgtgtaccgctctcaccatg
caacagattgtgaaaatcctcaacctctacaccccgctcaacgagtttgaggaaagagtc
actgtgtccttcatcagaaacatccagaatcgtctgcaggagaggaacgatgtcccaatg
ctcctggtggacaccaagcacaccttccctgtcctgttcccctataccccctcagccctc
agcctggagacccttcacatccctgccaacctcagcctacacttcctcactcgagtctga
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integrated database retrieval system
