Salvelinus namaycush (lake trout): 120025627
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Entry
120025627 CDS
T07522
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120025627
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
120025627
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
PMP1_2
CatAgl_D1
Motif
Other DBs
NCBI-GeneID:
120025627
NCBI-ProteinID:
XP_038826101
UniProt:
A0A8U0PKE4
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Position
Sna31:complement(41409476..41564658)
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AA seq
1306 aa
AA seq
DB search
MTWCDQWDDSCDGPLVSSLPQSSFRSSSQLSNSHGPGFAKVNRRDGAGGWAPVESNKYQW
LEVDLGERTEITAVATQGRYGSSDWVSSFLLMFSDTGRNWKQYRQEDSIGAFTGNSNADS
VVQFKLQQPVFARFLRLLPLDWNPNGRIGLRLEAYGCPYKSDVASFDGSGCLLYRFSPNT
TPILTAKDSISLKFKTLQNSGTLIHTEGQHDRSLTLELHKGKLLLHFRKGKSASPGPESH
TVVSLGSLLDDLHWHHVAIERVRGHVNFTVDKSTQQIQVPAELSPFEINEITFGGVQCHG
TQKVLSRRNFHGCLENLLWNEVNVNDLAKQHQEVSITGNVTFTCAEPVSVPVTFAGAQSF
LQLPGAALQQRDAGGGGVALVAVGVAISLQFRTWNRAGLLLTFDLQQQVGSLWLYLSETR
VRLQIHKAGRILLDVVTGFGLNDGQWHSVDLTARRGRLTITVDKEESSTAHASPSFPVVS
GNNLFFGGCPDSKTNQECRNPFNVFQGCMRHIHVDNNAVDLIKVQQMLIGNYSDLQIDMC
GIIDRCSPSHCEHGGRCTQSWSTFHCNCSNTGYSGATCHSSVYEQSCEVYKHKGNTTGLY
YIDVDGSGLIKPQLIYCNMTDKTWMVIQHNNTELTKLKASSGINQHLAYFNYSADAEQLG
AIITQAEHCEQEVFYHCRKSRLLNTPDGSPFTWWVGRTDEPQTYWGGAIPGSQQCGCGLQ
GNCIDSDHYCNCDADRKEWAADSGLLIHKENLPVRWVVVGDIQRPESEAAYRVSPLRCHG
DKNFWNAAFFNKETSYLHFPTFHGELSADISFLFKTTASSGVFLENLGIKDFIRVELSSS
MEVVFSFDVGNGPFEVRVETGGMALNDDRWHRVRAERNVKEASLCVDAFPCATQKAPADG
HIHLQLNSQLFVGGTASRMKGFLGCIRSLQLNGRTLDLEERAKITPGVSPGCPGHCSSYG
HLCQNQARCVERYNGFSCDCGLSAYAGPFCQREVSAYFKPGTSVQYTFKEPYELTRNTST
QSQSSSIYSDLTLRGENVSFSFRTTQRPALLLYICSYYREYLAVLLNRNGYLDVKYKLQN
SRDAEVFRTSIRNLANGQLHRVSIRRISETVSVQIDQHRREDFNLTSDTEFNAIKSVVLG
KVQESGELDPEIARLNSLGFSGCLSVVQFNSITPLKAALLYPNTSPVIVTGTLAESTCGS
SSPANPYPAETTHPLSDHSGTVGTGEPIVNAIKSDSALIGGVIAVVIFVILSALAIMVRF
LYRRKETFHSQEPKSIKPEADSPEYPFHSEPTSQNVLSENQKEYFI
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtgtgaccagtgggacgacagctgtgatggcccactggtgtccagcctgccc
cagtcctccttcagaagctcatcacagttatccaacagccatggacccggctttgccaaa
gtcaacaggagagatggtgccggaggctgggctcctgtagagtctaataagtaccagtgg
ttggaggtggacctgggggagcggacagagatcacagccgtggccacacagggtcgctac
ggcagctcagactgggtctcctccttcctcctcatgttcagcgacacgggacgcaactgg
aaacagtaccgccaggaggacagcatcggggcgttcactggaaacagcaatgcagacagt
gtggtgcagttcaaactgcagcagccagtctttgccaggttcctacggttacttcctctc
gactggaaccctaacgggaggataggcctgaggctggaggcctatggatgcccttacaag
tctgatgtggcaagtttcgacggcagcggctgcttgctctacaggttcagccccaacaca
acaccaattctaacagccaaagacagcatctctctgaagttcaaaaccctgcagaactct
gggacactgatacacacagagggacaacacgatcgcagcctcacgctggagttacacaaa
ggaaaacttttacttcacttcagaaaaggtaaaagtgcctctcctggtcctgagagccac
acggtcgtgtcactgggtagtcttctagatgacctgcactggcaccatgtagccatcgag
cgcgttagaggccatgtcaacttcactgtggataaaagcactcagcagatccaggtccct
gcagaactcagtccttttgagataaacgagataacctttggcggcgtccagtgccatgga
acacagaaggttctgtcccggaggaacttccatgggtgtcttgagaaccttctctggaat
gaggtgaacgtgaatgatctggccaagcagcaccaggaggtctccatcacgggcaatgtg
acctttacttgtgctgagccggtctccgtcccagtgacgttcgctggcgcccagagtttc
ctccagttgccgggtgcagctctacagcagagagacgccggtggcggcggggttgccttg
gtggcggttggtgtggcgatcagcctgcagttccggacctggaacagagcgggccttctg
ttaacctttgacctccagcagcaggtggggagcctgtggctctacctgagcgagaccaga
gtcaggctgcagatacacaaggctggcaggatcctactggacgttgtcacagggtttggt
ctgaacgacggccagtggcattcagtagacctgactgcaagaagaggtcgtctgaccatc
actgtggataaagaggaaagctccacggctcatgccagcccatcttttcctgtggtatca
ggaaacaacctcttctttggaggttgcccggatagcaagactaaccaggagtgcagaaac
cctttcaacgtgttccaaggctgtatgagacacatccatgtggataataatgctgtggac
ctgatcaaggtgcaacagatgctgataggaaactacagcgacctgcagattgacatgtgt
ggaattatcgacagatgctctccaagccattgtgaacacggtgggagatgcactcagtct
tggagtaccttccattgcaattgctctaacacaggctacagtggagcaacgtgtcacagc
tccgtctatgagcagtcatgtgaagtgtacaaacacaagggcaacacaacagggctgtat
tacatagacgtggatggaagcggcctgatcaagccacagctgatttattgcaacatgact
gataaaacttggatggtgatccaacacaataacacggagctaaccaaattaaaggcctcc
tctgggataaatcagcatttagcctattttaactattcggccgatgcggaacagctcggg
gccataattacccaggcagagcactgcgagcaggaagtcttctaccactgtagaaagtca
cgcctcttaaacacaccagatggatctccgttcacttggtgggtgggacgtacagacgag
ccccaaacgtactggggcggggcgataccagggagccagcagtgtggctgcggtcttcag
ggtaactgcatcgactcagaccactactgcaattgtgacgctgaccgcaaagaatgggct
gctgactctggcctgctcatccataaggagaatctaccagtcagatgggtggtggtgggg
gatatacagagacctgaatcagaggcagcctatagagtcagcccacttagatgtcatggc
gacaagaacttctggaacgcagcgttcttcaacaaagagacgtcgtacctgcacttcccc
acgttccacggagagctgagtgcagacatctccttcctgttcaaaaccaccgcctcttca
ggggtcttcctggaaaacctgggcattaaagacttcatacgggttgaactcagctcttcg
atggaggtcgtcttctcgtttgatgtgggcaatggcccctttgaggtgcgtgtggagacg
ggcggcatggcgctaaacgacgacaggtggcaccgcgttcgagcggagcggaacgtgaaa
gaggcttcactgtgtgtggacgctttcccgtgcgccacacagaaggcccccgccgacggt
cacatccatctgcaactcaacagccaattatttgtaggtggcactgcttccagaatgaaa
ggtttcctggggtgtatccgctcgctgcaactaaacgggaggactctggacctagaggag
agggctaagatcacgcccggggtgagtccgggctgcccgggacactgcagcagctacggg
catctgtgccagaaccaggcgaggtgtgtggagaggtacaatggcttctcctgcgactgt
ggcctctccgcctacgcaggccccttctgccagagagaggtctctgcttacttcaaacct
gggacatcagtccagtacacattcaaggagccgtacgagctgactagaaacaccagcact
cagtcccagtcctcctccatctactctgacctgacgctacgaggagagaatgtctcgttt
agctttagaaccacacagagacctgcgttactgctctacatctgctcctactacagagag
tacctggctgtgctgctcaacaggaatggttacctggatgttaaatataagctgcagaac
agtagagatgctgaggtattcaggaccagcataaggaacttggccaatggacaacttcac
agagtctccatcaggaggatatcagagactgtcagcgttcagattgaccagcacagaagg
gaagacttcaatctcacatctgatacagaattcaatgctatcaagtcagttgtccttggg
aaagtgcaagagtctggtgagctggatccggagattgccaggctgaactccctgggtttc
agtggctgtctgtcggtggtccagtttaactccatcactccactgaaggcagcgctactc
tacccaaacaccagcccagtcatagtgacaggaaccctagctgagtccacctgtggttcc
tcatctccagccaatccctacccagccgaaaccacacaccccctatcagatcattcaggt
acagtaggtactggtgagcctatagttaatgcaatcaagagtgactctgcattgattgga
ggtgtgattgctgtggtgatatttgtgattctgtctgcgttggcaataatggtaaggttc
ctgtatcgacggaaagagacgttccacagccaagaaccaaaaagcatcaaacctgaggca
gacagtcctgagtaccctttccacagcgagcccacctcacagaacgtactaagtgaaaac
caaaaggagtatttcatatag
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