Salvelinus namaycush (lake trout): 120025731
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Entry
120025731 CDS
T07522
Symbol
srsf9
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120025731 (srsf9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120025731 (srsf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120025731 (srsf9)
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120025731 (srsf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120025731
NCBI-ProteinID:
XP_038826251
UniProt:
A0A8U0PJV1
LinkDB
All DBs
Position
31:complement(35382054..35385586)
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AA seq
252 aa
AA seq
DB search
MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDVELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP
PSGSWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMAS
IRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHP
VTHHSPPPRHYR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggatgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatgtcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggaggcggagaaagaggagaaggagggggtcctaag
gggaggtttgggcctccaactcggagatctgagttccgggtgatagtgactggcttgccc
ccatcagggagctggcaggatcttaaagaccacatgcgtgaggcaggggatgtgtgtttc
gccgatgtgcagcgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggag
tatgccctgcgcagactggacaggactgagttccgttcccatcagggggagatggcaagc
attcgtgtccacggagaacatggtgccagttatggtcgctcgcagtcccgctccagatcc
ccccgggggcgtggctactcaccacctccttacaaaagcagagggtcccctccacagcgc
taccagtcacctccacggcgccatgtgtcccgccatagccccccagcgaggcgacaccca
gtaacacaccacagcccacccccacgccactaccggtag
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