Salvelinus namaycush (lake trout): 120025744
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Entry
120025744 CDS
T07522
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03030
DNA replication
snh03082
ATP-dependent chromatin remodeling
snh03410
Base excision repair
snh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120025744 (pole3)
03410 Base excision repair
120025744 (pole3)
03420 Nucleotide excision repair
120025744 (pole3)
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120025744 (pole3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snh03032
]
120025744 (pole3)
03036 Chromosome and associated proteins [BR:
snh03036
]
120025744 (pole3)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120025744 (pole3)
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120025744 (pole3)
DNA replication proteins [BR:
snh03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
120025744 (pole3)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120025744 (pole3)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
120025744 (pole3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
BUD22
CIS_TMP
PPP4R2
SpoU_methylase
RNA_pol_3_Rpc31
DUF4746
Motif
Other DBs
NCBI-GeneID:
120025744
NCBI-ProteinID:
XP_038826278
UniProt:
A0A8U0TSA2
LinkDB
All DBs
Position
Sna31:18121684..18126027
Genome browser
AA seq
151 aa
AA seq
DB search
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNATDVMSAMEEMEFERFLQPLRESLEAYKKGQKGKKEASEQKRKDAKEKKNDVEEN
DKSREEEEEEEERMEEDQDADNEVEEEEVEN
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagacccgaggacctcaatctacccaatgctgtcatcacgcgcatcatcaag
gaggcgctaccagatggggtgaacgtgtcaaaagaagccaggcgagccatatctcaagct
gccagtgtattcgtcctctatgcaacatcttgtgcaaacaattttgccatgaaagccaaa
cggaaaactctaaacgcaacagatgtgatgtctgcgatggaggagatggagtttgaacgc
ttcttgcagcctctacgtgaatctttggaggcttacaagaagggccagaaggggaagaaa
gaggcatcggaacaaaaacgcaaagatgcaaaggagaaaaagaacgatgtggaagagaac
gacaagagcagggaggaggaagaggaggaggaagagcgcatggaggaagaccaggatgca
gacaatgaggttgaagaggaagaagttgagaattga
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