Salvelinus namaycush (lake trout): 120025799
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Entry
120025799 CDS
T07522
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120025799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120025799
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120025799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
120025799
NCBI-ProteinID:
XP_038826388
UniProt:
A0A8U0PKT5
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All DBs
Position
Sna31:complement(33091932..33142718)
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AA seq
2670 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPIMPQ
YKMSQNSMHGSPASTNYQQSTISHSPSSRFASPQMGSGARFTPQQNSPVPSPYAPQSPAS
YMQQYPHPPSYSQHQQIQQVASPVVPASMRNIHDNKVSGQISSNSANHNARHGSNEDYMN
IVHRLGNEESDPSMRNASFPLRSPQSVSSPVGSEGTPKGSRPGLILQSPPPYTPPRDSAP
DLLLDSPDHKKKQKKLTKEEKEQLEKAAMYDIVSSPSKDSTKLTLKLSRVKSSELDQSGE
LLSGVEDQDTDLAYNSLQFSRTQQDPAHRLAPGQGEQSGYQQVPVLQNTKQAIGVISGAV
YDDAEMDALAEIERIERETLIERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGATQP
GVGGGNAGSKLAPQEASAASNGASRPALMVSIDLQQAGRADGQPEVNMGTPTPAVEARRW
PEERLGPEDGSDSTGVLRLKSKTDGERLQTADGRPEVIKQRADTPKKLGPDGRTETPKHK
HENRRDSSKHRHDGKPDNGKARPDSRTPDTPRQRHEGRSDSGHREDRSSDPSRIRRPETP
SKSSRGDHDSKHGRDRDRERADKDRERKHRTETGEPRDRRSPEQRSRPESPRVKQEGRGG
VDPSVRQRTDRPCPNLKPPNKEERRSGEERRSGDGSRNRQDSKQQQQPAESKQEFPAYLL
GGVKSGGFKNFVIPKMKRDKDGHVLAAEMRKPGSGLGPVMEGWSEPRVKLERLGLVEEMK
TGAKPVVVLQKLSIDEVQKIIREREDRNARGSKSSKSRHSHEKSGKGGLDESVLKELPPH
LIAEIESTMPLCERVKMNKRKRSTVNEKPKYAEVDSDDSDDDSVTESARKRHKKEREKTW
APDERERRGSGEHRRSSGGSQERRKGSGRRYRERSPEESDEESPPPSMSDLARKMKKKEK
QKKRKAYEPKLTPEELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQL
SELGSESAKIKAMGITFRLPSDKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRD
LIMERVTKSADACLTALNIMTSSRMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRV
NPHGGGYLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMG
ITPFFVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSS
DKDGEPMYIQMVTALVLQLIQCVVHLPNNRDSHDDEYNKKVDQDVQITNSYETAMRAAQN
FLSVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNKQ
TEMALRVASLDYLGTVAARLRKDAVTSQMDQRSIDRILKETQGNDETQQLQKALLDYMDE
NAETDPSLVFARKFYIAQWFRDTLTETEKAMKSQNQRGDEDSSEGQHHAKDIESTGEIMQ
RAEARKKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQIL
RVLGESAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRF
VLSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVND
EEGIKKLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKT
EEDASYKPARKACVQLVDNLVEHILKYEESLADIENKGVNSNRLVSCITTLFLFSKNRAQ
LMVKHAMTMQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLTI
KYGMTVVQHCVSCLGAVVNRVTHNYKFVWACFNRYYGALTKLKTQHSEDCNNPVLAANKP
ALLRSLFTVGALCRHFDFDQEEFKGPSKVVIKDKVMELLLYFTKHEDEEVQTKAIIGLGF
QFIQYPGLMFMQDVKSLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKL
SKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSNVRHFALNVIALTLNQGLIHPVQ
CVPYLIAMGTDPEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIWSAKGTV
IRGYRQDETTSALCAHLFSMVRSNRQHRRAFLISLLSLFDDSSKMEVNMLLYIADNLACF
PYQSQEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRRREKKQKERKYHSEEENSEEE
DRHSSRSNSSDEDDEVVHRPKKPKHRAQAHVESDSDSDLEMEDLDKVMQRLPDNPVPLLD
FANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSHVHFSPRQTLD
FLTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITSLLG
GSSHQDHKNHHQAPIETDDDESDGDEKTPGSSRRSRKHGDSAEASGHMNETVGSMDVIAL
CCPKYKDRPQIARVIQKTNTGYRVHWMAGSYSGVWAEAKKRDGRKTVPWVDTIKESDIIY
KKIPLTSAHKLTNRVVQTLRSLYSAKDGTS
NT seq
8013 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattactactcttgctgggatcgctagccttaca
gacttgttaaaccagctgcccctgccatcccctctccctgccaccaccactaagagtctg
ctgtacaatgggaggatcgcagaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccaccgagcacatagagctgaag
gacaacttgggcagtgatgacccggagggtgacgtgcctgtgctgctgcagacagtgctc
tctaggaacccaaacatcttcagggagaaaaatataatgcagcagccaataatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaatcc
actatctcacacagcccttctagtcgctttgcatctccacagatggggtccggcgctagg
ttcacaccccagcagaacagccctgtgcctagcccttatgccccccaaagccctgcaagt
tacatgcagcagtaccctcatccccccagctattctcagcaccaacagatccagcaagtt
gccagtcccgtggttcctgctagcatgcggaacatccacgacaacaaggtctccgggcaa
atttcaagcaactcagccaatcacaatgccagacatggctcgaacgaagactacatgaac
atagtccacagactagggaatgaggagagtgatccttccatgagaaatgcctccttcccg
ctccgatcgccccagtctgtttcttcccctgtgggcagcgaagggaccccaaaagggtca
cgacctggcctcattctgcaatcccctccaccttatactcccccccgtgactccgctccc
gacctcctcctggactctcctgaccacaagaagaagcagaagaagctaactaaagaggag
aaagagcagttggaaaaagctgccatgtacgacattgttagctctccctctaaagactct
accaagctgacgctcaaactgtcccgggtgaagtcctctgagctggaccaatctggagag
ctcctatccggggtagaggaccaggacactgacctggcctacaacagcctgcagttctcc
cggacgcagcaggaccctgcccacaggttagccccgggccagggggagcagtcaggctac
cagcaggtccctgtgctccagaacaccaaacaggctataggggtgatcagcggagctgtg
tacgacgatgctgagatggatgctcttgctgagatcgagaggatagaacgagagacgctc
atagaaagggagcgctgctccaaagaggttcaggataaagacaagccactgaagaagcgg
aagcaggactcgtatccccaagagcctggcgctggaggtacagcgggggcaactcagcct
ggcgtgggagggggcaatgctggcagcaagttggcaccccaggaggctagtgcagccagt
aatggtgccagccggccagccctaatggtcagcatcgacctgcagcaagcaggcagagct
gacgggcagccagaggtgaacatgggcacccccaccccagccgtggaggcccggcgctgg
cccgaggaacgcctgggtccagaggacggctccgactctaccggagtcctgcggctaaag
tccaagactgatggagagcgactacagactgcagacggccggccagaggtcatcaagcag
cgcgccgacacccccaagaagctgggccccgacggccgaacggagacccctaaacacaag
cacgaaaacagaagagactcgtccaaacacagacacgatggaaaacctgacaatggcaag
gcccgacctgacagcaggacgcctgacacgccacgacaacggcacgagggccgctcagac
tctggtcacagggaagacaggtccagcgacccatcccgtatccgcaggccagagaccccc
agcaagtccagcaggggggatcacgactccaaacatggacgggacagagacagggagcgg
gcggataaagacagggagaggaaacacaggacagagacaggggaaccacgggaccgtcgg
tctccagagcagcgctccaggccagagagcccgcgggttaagcaggagggccgagggggg
gtggaccccagtgtgcgccagaggactgaccggccatgccccaacctcaaaccccctaat
aaagaggagaggaggagcggggaggagaggaggagtggggacggcagcaggaaccgacag
gactccaagcagcaacagcagcctgctgaaagcaaacaggagttccctgcctacctgcta
gggggggtaaagtctggaggctttaagaactttgtgattcccaagatgaagcgggataag
gatgggcatgtgttggcagctgagatgaggaagcctgggtctggtctggggcctgtaatg
gagggctggagcgagccccgggtcaagctggagcgactggggcttgtagaggagatgaag
acaggagccaaacctgttgtggtgctgcagaaactcagcatcgacgaggtgcagaaaatc
atcagggaaagggaggacaggaacgcacgcggctccaagtcctccaagagcagacactct
catgagaagtctgggaaaggaggtcttgatgaatcagtgttgaaagaactgcctcctcat
ctcattgctgagatagagtccaccatgccactgtgtgagagagtgaagatgaacaaacgc
aagcgcagcaccgtcaacgagaagcccaagtatgccgaagtcgactccgacgactcagac
gacgactctgtgacggagtctgcacggaagcgtcacaagaaggagcgagaaaagacgtgg
gcgcctgatgagcgggagaggagaggctcaggagagcaccggaggagtagtgggggctcc
caggagcggcgcaagggatccggcaggcgctaccgagaacgcagcccagaggaatcggat
gaggaatccccaccacccagcatgagtgaccttgccagaaagatgaagaagaaggagaaa
cagaagaagaggaaggcatatgagcccaagctgacaccagaagaactgatggactcctcc
acgttcaagaggttctcagccagtgtggacaacattctggagagcttggaggacattgac
ttcaatgccatggatgatgatgagatcccacaggagcttctgctggggaaacaccagctg
agtgagctgggcagcgaatctgctaagatcaaggccatgggcatcaccttcaggcttcca
tctgataagttggtgaaggtcctgaacatcctggagaagaacattcaggacggttccaag
ctctccacactgatgaaccatgacgcagacgcagaagacgaggagcggctgtggcgtgac
ctcatcatggagcgcgtgaccaagtcagctgacgcctgtctgacggccctcaacatcatg
acgtcgtcccgcatgcccaaggcggtgtacatcgaggacgtgattgagagggtgctgcag
tacaccaagtttcacctgcagaacaccctctaccctcagtatgaccctgtctacagagtg
aaccctcatggaggtggctatctgagctccagggctaagagggctaaaagctccacacac
aagcagagggtgatcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatctct
gagctcctggagatacagctgttgactgacaccaccatcctgcaggtctcctcaatgggc
atcactccattctttgtggagagtgtcagtgagctacagctgtgtgccatcaaactggtg
actgcggtgttctctcgctatgagaagcacaggcagctcatcctggaagagatcttcacc
tctctggccagactacccaccagcaaacgcagcctcaggaacttcaggctgaacagcagt
gataaggatggggagcccatgtacatccagatggtcacagctctggtgcttcagctcatc
cagtgtgtggtgcacctccccaacaacagggacagtcacgacgatgagtacaacaagaag
gtggatcaagatgtccagatcactaactcttatgagacggccatgagagcagctcagaac
ttcctgtccgtcttcctaaagaagtgtggcagtaagcagggagaggaggactaccggccg
ctgtttgagaactttgtccaggacctgctgtctacggtgaacaaaccagagtggccagct
tcagagcttctcctcagtctgctgggccgtctactggtgcaccagttcagtaataagcag
acggagatggctctgagggtggcatcgcttgactacctgggcacggtcgctgcccgcctg
cggaaagacgccgtcaccagccagatggaccagcgctccattgaccgcatcctcaaagag
acccaaggcaatgatgagacccagcagctacagaaagccttgctggattacatggatgag
aacgcagagacggatccatctctagtttttgccaggaagttctacatagctcagtggttc
agggacactttgacagagacagaaaaggccatgaagtctcagaaccagcgaggggacgag
gactcttctgaaggccagcaccacgccaaggacatcgagagcaccggcgagatcatgcag
agagctgaggcccgcaagaagtacctccgcaacatcatcaagaccgcgccctcgcagttc
agcacactgaggatgaactctgacactgtggactatgacgactcctgcctgattgtcaga
tatttggcctctatgaggccgtttgcgcagagcttcgatatttatttaacacagatcctg
cgagtgctgggggagagtgccatagctgtcagaacgaaagccatgaagtgtttgtctgag
gtggtggctgtagaccccagtattctagccaggttggacatgcagcgcggggtccatggt
cgtctgatggacaactccaccagtgttcgcgaagctgcagtggagctgctgggacgcttt
gtgctgagcagaccccagctcacagagcagtactacgacatgctgatcgagagaatactg
gacacgggtatcagtgtgaggaagagggtgatcaagatcttgagagacatctgtctggag
caacccaccttcaacaagatcactgagatgtgtgtcaagatgatccgcagggtcaacgac
gaggagggcatcaagaaacttgtgaatgagaccttccagaaactctggttcacccctaca
cccaatcacgataaagacgccatgacccgtaagatcctcaacatcacagatgtggtgtct
gcatgcaaagatacaggctatgactggtttgagcagctgcttcaaaacctgctgaagacg
gaggaagatgcttcctataaaccagccagaaaggcctgcgttcagctggtggacaatcta
gtggaacacatcctcaaatacgaagagtctctcgctgatatcgagaacaagggggtgaac
tccaatcgtctggtgtcctgcatcaccaccctcttcctgttcagtaagaatcgagcccag
ctgatggtcaaacatgccatgaccatgcagccttacctcaccaccaagtgcaacacccag
agtgacttcatggtgatctgtaacgtggccaagatcctggagctggtgatccctctgatg
gagcacccctctgagaccttcctcaccaccatagaggaagacctcatgaaactcaccatc
aaatacggcatgacggttgtgcaacactgtgtgagctgtcttggagctgtcgtgaaccgg
gtcactcacaactacaagtttgtttgggcttgtttcaaccgttactatggtgccctgacc
aagctgaagacccagcactcagaggattgcaacaatcctgttctggctgctaacaaaccg
gccttgctgcgctcgctgttcactgtgggggcgctctgtcgccactttgactttgaccag
gaggagttcaagggccccagcaaggttgtgataaaggacaaagtaatggaacttctgctg
tacttcaccaaacatgaagatgaggaagttcagaccaaggccatcattggtctaggcttc
cagttcatccagtacccagggctgatgttcatgcaggatgtgaagagtctgtacaacggc
atcctgtcggacaggaagagctccgtcaacctgaagatccaggtgctgaagaacctgcag
acatacctgcaggaggaggattctcgcatgcaggaggcggaccaacagtggaagaagctg
tcgaagcaggaggacctgaaggagatgggggacatctcgtcaggcatgagcagctccatc
atgcagctgtacctgaagcaggtgctggaggccttcttccacacacagtccaacgtacga
cactttgccctcaacgtcatcgccctgacgctcaaccagggcctcatccatcctgtgcag
tgtgtgccctacctgattgccatgggaacggacccagagcccaccatgaggaacaaggct
gaccagcagctggtggagattgataagaagtacaccggcttcatccatatgaaagccgtg
gcggggatgaagatgtcctaccaggtacagcaagctatctggtcagctaagggtacggtg
atccgtggctaccggcaggacgagaccacctcggccctctgcgcccacctcttctctatg
gtccgatccaaccggcagcaccgacgagccttcctcatctcactgctcagcctgtttgat
gacagctcgaagatggaggtaaacatgctcctgtacatagcagacaacctggcctgtttc
ccctaccagagccaggaggagcccctgttcatcatgcaccacatagacatcaccctgtct
gtgtccggcagcaacctgctgcagtccttcaaggagtcccttctcaaagagccgaggcgg
cgggagaagaagcagaaagagaggaagtaccactcggaggaggagaactctgaggaggag
gatcgtcacagcagccgctccaacagcagtgacgaggacgatgaggtggtccacaggccc
aagaagcccaaacaccgggcccaggcccacgtggagtctgactctgactctgacctggag
atggaggacttggacaaggtgatgcagcgtctgcctgacaaccccgtccccctgttggac
tttgccaacgcctcgcagggtatccttctgctgttggttctcaagcagcacctaaagaac
ctctatggcttctcagacagtaaaatccagaagtactctccgacggaatcggccaaggtg
tacgagaaggctgtgaacaggaagagtcacgtgcacttcagcccacgccagacattggac
tttttaacctctgacctggccaatgttgaactgacctacgacatcaagaggaggatcgtc
aaacagtatcttgattttaagttactgatggagcacttggaccctgatgaagaggatgag
gaaggtgaggcgtctgccagcgctaacgccagaaacaaagccatcacttcactgctggga
gggtccagccaccaggaccacaagaaccaccaccaggctcctatagagacggacgacgac
gagagcgacggagacgagaaaaccccagggtcatcacgaagatccaggaagcacggcgac
tctgcggaggcatcaggtcacatgaacgagacggtaggttccatggacgtcatcgccctc
tgctgccccaagtacaaggaccggccacagatcgcacgcgtcatccagaagaccaacacg
ggctacagggtgcactggatggctgggtcctactctggagtctgggctgaggctaagaaa
cgggacggacgcaaaactgtgccttgggtggacactatcaaggagtcagacattatttac
aagaaaatacccttgacgagtgcacacaagctgacgaacagagtggtgcagactttacgg
tcactgtactcagccaaggacggaacttcctaa
DBGET
integrated database retrieval system
